Wei Wang

Molecular Biology · Journal of Molecular Graphics and Modelling · 2000–2016

A researcher in the Science corpus: 10 papers; trusts 4 researchers and is trusted by 16 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 114 citations into it; #4,100 of 17,773 by trust here, #1,418 by citations
• Computational Chemistry & Drug Discovery — 17 citations into it
• Physical and Theoretical Chemistry — 7 citations into it; #194 of 671 by trust here, #156 by citations
• Cell Biology — 6 citations into it

Whom Wei Wang trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Charles H. Bennett
2. Junmei Wang
3. Peter A. Kollman
4. W. L. Jorgensen
5. Alexander D. MacKerell

Who trusts Wei Wang overall

1. Junmei Wang
2. Shengyou Huang
3. Markus J. Buehler
4. Xiaoqin Zou
5. Gang Bao
6. Samuel Genheden
7. David L. Mobley
8. Wenbo Yu
9. A. W. Sousa da Silva
10. M. Jackson

Papers from Wei Wang's perspective

Ordered by how strongly the researchers Wei Wang trusts endorse each paper. Same corpus, a different order for every researcher.

1. A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules J. Am. Chem. Soc. 1995, 117, 5179−5197
2. All-atom empirical potential for molecular modeling and dynamics studies of proteins.
3. Efficient estimation of free energy differences from Monte Carlo data
4. A five-site model for liquid water and the reproduction of the density anomaly by rigid, nonpolarizable potential functions
5. Comparison of simple potential functions for simulating liquid water
6. A smooth particle mesh Ewald method
7. NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins (Nucleic Acids Res.)
8. High-resolution profiling of histone methylations in the human genome. (Cell)
9. GENCODE: producing a reference annotation for ENCODE (Genome Biology)
10. Genome-wide analysis of mammalian promoter architecture and evolution (Nature Genetics)

Their papers

• Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome (2007) — 3,418 citations
• Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain (2016) — 921 citations
• Distinct Epigenomic Landscapes of Pluripotent and Lineage-committed Human Cells (2010) — 843 citations
• Automatic atom type and bond type perception in molecular mechanical calculations. (2006) — 5,066 citations
• Use of MM-PBSA in reproducing the binding free energies to HIV-1 RT of TIBO derivatives and predicting the binding mode to HIV-1 RT of efavirenz by docking and MM-PBSA. (2001) — 685 citations
• Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models. (2000) — 4,533 citations
• Human Body Epigenome Maps Reveal Noncanonical DNA Methylation Variation (2015) — 641 citations
• Biomolecular simulations: recent developments in force fields, simulations of enzyme catalysis, protein-ligand, protein-protein, and protein-nucleic acid noncovalent interactions. (2001) — 521 citations
• Assessing the performance of the MM/PBSA and MM/GBSA methods: I. The accuracy of binding free energy calculations based on molecular dynamics simulations (2010) — 2,526 citations
• Assessing the performance of the MM/PBSA and MM/GBSA methods: II. The accuracy of ranking poses generated from docking (2010) — 711 citations