Patrick S. G. Chain
Molecular Biology · 2012–2023
A researcher in the Science corpus: 8 papers; trusts 15 researchers and is trusted by 2 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 193 citations into it; #14,339 of 17,773 by trust here, #977 by citations
- Ecology — 111 citations into it; #8,276 of 10,717 by trust here, #6,392 by citations
- Genetics — 21 citations into it
- Computational Biology & Bioinformatics — 11 citations into it
Whom Patrick S. G. Chain trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Who trusts Patrick S. G. Chain overall
Papers from Patrick S. G. Chain's perspective
Ordered by how strongly the researchers Patrick S. G. Chain trusts endorse each paper. Same corpus, a different order for every researcher.
- BLAT--the BLAST-like alignment tool. (Genome Research)
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- Community structure and metabolism through reconstruction of microbial genomes from the environment (Nature)
- Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
- FragGeneScan: predicting genes in short and error-prone reads
- Trimmomatic: a flexible trimmer for Illumina sequence data (Bioinform.)
- metaSPAdes: a new versatile metagenomic assembler.
- The RAST Server: Rapid Annotations using Subsystems Technology (BMC Genomics)
- Fast and sensitive protein alignment using DIAMOND
- ABySS: a parallel assembler for short read sequence data. (Genome Research)
Their papers
- A framework for human microbiome research (2012) — 2,418 citations
- Structure, Function and Diversity of the Healthy Human Microbiome (2012) — 10,771 citations
- Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis. (2012) — 361 citations
- Identification of mobile genetic elements with geNomad (2023) — 813 citations
- Advances and Challenges in Metatranscriptomic Analysis (2019) — 318 citations
- Hi-C deconvolution of a human gut microbiome yields high-quality draft genomes and reveals plasmid-genome interactions (2017) — 101 citations
- Metagenomic reconstruction of nitrogen cycling pathways in a CO2-enriched grassland ecosystem (2017) — 96 citations
- Contrasting elevational diversity patterns between eukaryotic soil microbes and plants (2014) — 181 citations