Giovanni Bussi

Molecular Biology · 2007–2020

A researcher in the Science corpus: 11 papers; trusts 19 researchers and is trusted by 29 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 185 citations into it; #1,407 of 17,773 by trust here, #2,926 by citations
• Atomic and Molecular Physics, and Optics — 80 citations into it; #556 of 7,135 by trust here, #873 by citations
• Materials Chemistry — 73 citations into it; #2,579 of 11,513 by trust here, #6,608 by citations
• Spectroscopy — 39 citations into it
• Condensed Matter Physics — 28 citations into it; #148 of 1,948 by trust here, #133 by citations
• Statistical and Nonlinear Physics — 23 citations into it; #7,357 of 10,127 by trust here, #8,981 by citations
• Computational Chemistry & Drug Discovery — 11 citations into it
• Computer Networks and Communications — 10 citations into it

Whom Giovanni Bussi trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Luca Maragliano
2. Michele Parrinello
3. Alessandro Laio
4. Eric F Darve
5. Eric Vanden-Eijnden
6. James C. Spall
7. Massimiliano Bonomi
8. Alessandro Barducci
9. J. Kästner
10. Berend Smit

Who trusts Giovanni Bussi overall

1. B. Leimkuhler
2. Michele Ceriotti
3. Justin A. Lemkul
4. J'erome H'enin
5. Tim Dockhorn
6. Djurre H. De Jong
7. Artur Meller
8. Cameron F. Abrams
9. Carter J. Wilson
10. Joshua More

Papers from Giovanni Bussi's perspective

Ordered by how strongly the researchers Giovanni Bussi trusts endorse each paper. Same corpus, a different order for every researcher.

1. IL-13受体α2降低血吸虫病肉芽肿的炎症反应并延长宿主存活时间[英]/Mentink-Kane MM,Cheever AW，Thompson RW，et al//Proc Natl Acad Sci U S A
2. Proteins
3. Nonequilibrium Statistical Mechanics
4. Statistical Mechanics: Theory and Molecular Simulation
5. Escaping free-energy minima
6. Replica Exchange with Solute Scaling: A more efficient version of Replica Exchange with Solute Tempering (REST2) (Journal of Physical Chemistry B)
7. Well-tempered metadynamics: a smoothly converging and tunable free-energy method. (Physical Review Letters)
8. Calculating free energies using average force
9. Adaptive biasing force method for scalar and vector free energy calculations. (Journal of Chemical Physics)
10. Reconstructing the equilibrium Boltzmann distribution from well‐tempered metadynamics (Journal of Computational Chemistry)

Their papers

• Canonical sampling through velocity rescaling. (2007) — 16,445 citations
• Enhanced Sampling in Molecular Dynamics Using Metadynamics, Replica-Exchange, and Temperature-Acceleration (2013) — 405 citations
• Well-tempered metadynamics: a smoothly converging and tunable free-energy method. (2008) — 2,243 citations
• PLUMED: A portable plugin for free-energy calculations with molecular dynamics (2009) — 1,723 citations
• PLUMED 2: New feathers for an old bird (2013) — 3,173 citations
• Accurate sampling using Langevin dynamics. (2007) — 366 citations
• Using metadynamics to explore complex free-energy landscapes (2020) — 567 citations
• Promoting transparency and reproducibility in enhanced molecular simulations (2019) — 1,046 citations
• Pressure control using stochastic cell rescaling. (2020) — 814 citations
• RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview (2018) — 517 citations
• Colored-Noise Thermostats à la Carte (2010) — 261 citations