Justin A. Lemkul
Molecular Biology · 2009–2019
A researcher in the Science corpus: 3 papers; trusts 37 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 50 citations into it
- Atomic and Molecular Physics, and Optics — 22 citations into it
- Materials Chemistry — 20 citations into it
- Spectroscopy — 13 citations into it
- Physical and Theoretical Chemistry — 5 citations into it
Whom Justin A. Lemkul trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Berk Hess
- Alexander D. MacKerell
- Kenno Vanommeslaeghe
- Charles H. Bennett
- Michele Parrinello
- Michael R. Shirts
- T. Darden
- Andrej Sali
- Giovanni Bussi
- Jochen S. Hub
Papers from Justin A. Lemkul's perspective
Ordered by how strongly the researchers Justin A. Lemkul trusts endorse each paper. Same corpus, a different order for every researcher.
- VMD: visual molecular dynamics.
- CHARMM: The biomolecular simulation program
- g_wham—A Free Weighted Histogram Analysis Implementation Including Robust Error and Autocorrelation Estimates
- A smooth particle mesh Ewald method
- CHARMM General Force Field (CGenFF): A force field for drug-like molecules compatible with the CHARMM all-atom additive biological force fields
- Automation of the CHARMM General Force Field (CGenFF) I: Bond Perception and Atom Typing (Journal of Chemical Information and Modeling)
- Scalable Algorithms for Molecular Dynamics Simulations on Commodity Clusters (International Conference on Software Composition)
- GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation. (Journal of Chemical Theory and Computation)
- All-atom empirical potential for molecular modeling and dynamics studies of proteins.
- An Automated Force Field Topology Builder (ATB) and Repository: Version 1.0. (Journal of Chemical Theory and Computation)
Their papers
- CHARMM-GUI Input Generator for NAMD, GROMACS, AMBER, OpenMM, and CHARMM/OpenMM Simulations Using the CHARMM36 Additive Force Field (2015) — 3,937 citations
- From Proteins to Perturbed Hamiltonians: A Suite of Tutorials for the GROMACS-2018 Molecular Simulation Package [Article v1.0] (2019) — 506 citations
- GridMAT‐MD: A grid‐based membrane analysis tool for use with molecular dynamics (2009) — 301 citations