Philippe Derreumaux

Molecular Biology · 2009–2021

A researcher in the Science corpus: 6 papers; trusts 8 researchers and is trusted by 5 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 67 citations into it; #7,986 of 17,773 by trust here, #11,608 by citations
• Materials Chemistry — 27 citations into it
• Computational Biology & Bioinformatics — 19 citations into it

Whom Philippe Derreumaux trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Adam T. Zemla
2. David C. Jones
3. Yang Zhang
4. Stephen F. Altschul
5. Julien Maupetit
6. Jeffrey Skolnick

Who trusts Philippe Derreumaux overall

1. Pierre Thévenet
2. Alexis Lamiable

Papers from Philippe Derreumaux's perspective

Ordered by how strongly the researchers Philippe Derreumaux trusts endorse each paper. Same corpus, a different order for every researcher.

1. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
2. LGA: a method for finding 3D similarities in protein structures
3. Protein secondary structure prediction based on position-specific scoring matrices.
4. Synthetic therapeutic peptides: science and market. (Drug Discovery Today)
5. The HADDOCK web server for data-driven biomolecular docking (Nature Protocols)
6. PEP-FOLD: an online resource for de novo peptide structure prediction (Nucleic Acids Res.)
7. Rosetta FlexPepDock web server—high resolution modeling of peptide–protein interactions (Nucleic Acids Res.)
8. Knowledge‐based protein secondary structure assignment
9. Rosetta predictions in CASP5: Successes, failures, and prospects for complete automation
10. GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers

Their papers

• PEP-FOLD: an online resource for de novo peptide structure prediction (2009) — 406 citations
• Improved PEP-FOLD Approach for Peptide and Miniprotein Structure Prediction. (2014) — 599 citations
• PEP-FOLD: an updated de novo structure prediction server for both linear and disulfide bonded cyclic peptides (2012) — 632 citations
• Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer’s Disease, Parkinson’s Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis (2021) — 544 citations
• PEP-FOLD3: faster de novo structure prediction for linear peptides in solution and in complex (2016) — 958 citations
• Amyloid β-protein and Alzheimer's Disease: When Computer Simulations Complement Experimental Studies (2015) — 548 citations