Urmas Kõljalg
Molecular Biology · 2005–2023
A researcher in the Science corpus: 15 papers; trusts 7 researchers and is trusted by 1 researcher here, as inferred from the citation graph.
Subfields
- Molecular Biology — 162 citations into it; #16,356 of 17,773 by trust here, #3,004 by citations
- Plant Science — 127 citations into it; #6,761 of 8,232 by trust here, #145 by citations
- Cell Biology — 100 citations into it; #1,679 of 2,073 by trust here, #20 by citations
- Ecology — 94 citations into it
- Ecology, Evolution, Behavior and Systematics — 64 citations into it
- Genetics — 29 citations into it
- Nature and Landscape Conservation — 26 citations into it
- Paleontology — 15 citations into it
Whom Urmas Kõljalg trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Alexandros Stamatakis
- Kessy Abarenkov
- Leho Tedersoo
- M. Blackwell
- Sarah C. Goslee
- Hong Qian
- Emmanuel Paradis
Who trusts Urmas Kõljalg overall
- Leho Tedersoo
- M. Buée
- T. Suvi
- Damon P. Little
- Cristina Aponte
- R. Henrik Nilsson
- K. Gdanetz
- Tuomo Kalliokoski
- Zachary S. L. Foster
- Davide Francioli
Papers from Urmas Kõljalg's perspective
Ordered by how strongly the researchers Urmas Kõljalg trusts endorse each paper. Same corpus, a different order for every researcher.
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities (Applied and Environmental Microbiology)
- QIIME allows analysis of high-throughput community sequencing data (Nature Methods)
- Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy (Applied and Environmental Microbiology)
- RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
- SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB (Nucleic Acids Research)
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates. (Environmental Microbiology)
- The UNITE database for molecular identification of fungi--recent updates and future perspectives. (New Phytologist)
- Ironing out the wrinkles in the rare biosphere through improved OTU clustering (Environmental Microbiology)
- MRBAYES: Bayesian inference of phylogenetic trees (Bioinform.)
Their papers
- The UNITE database for molecular identification of fungi--recent updates and future perspectives. (2010) — 1,822 citations
- Taxonomic Reliability of DNA Sequences in Public Sequence Databases: A Fungal Perspective (2006) — 657 citations
- UNITE: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi. (2005) — 1,087 citations
- Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi (2014) — 432 citations
- Improving ITS sequence data for identification of plant pathogenic fungi (2014) — 146 citations
- Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences. (2012) — 200 citations
- Evolution of nutritional modes of Ceratobasidiaceae (Cantharellales, Basidiomycota) as revealed from publicly available ITS sequences (2013) — 116 citations
- The UNITE database for molecular identification and taxonomic communication of fungi and other eukaryotes: sequences, taxa and classifications reconsidered (2023) — 624 citations
- High-level classification of the Fungi and a tool for evolutionary ecological analyses (2018) — 581 citations
- The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications (2018) — 3,023 citations
- Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi (2015) — 529 citations
- Global diversity and geography of soil fungi (2014) — 3,270 citations
- The distance decay of similarity in communities of ectomycorrhizal fungi in different ecosystems and scales (2013) — 148 citations
- Towards a unified paradigm for sequence‐based identification of fungi (2013) — 3,224 citations
- Fungal community analysis by high-throughput sequencing of amplified markers – a user's guide (2013) — 857 citations