Emek Demir
Molecular Biology · 2009–2021
A researcher in the Science corpus: 6 papers; trusts 3 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 131 citations into it
- Statistical and Nonlinear Physics — 5 citations into it
Whom Emek Demir trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Who trusts Emek Demir overall
- Huaiyu Mi
- Paul D. Thomas
- Anushya Muruganujan
- Atanas Kamburov
- Guanming Wu
- Bonnie Berger
- Martina Kutmon
- Caroline F. Thorn
Papers from Emek Demir's perspective
Ordered by how strongly the researchers Emek Demir trusts endorse each paper. Same corpus, a different order for every researcher.
- Integration of biological networks and gene expression data using Cytoscape (Nature Protocols)
- Cytoscape: a software environment for integrated models of biomolecular interaction networks.
- DAVID: Database for Annotation, Visualization, and Integrated Discovery (Genome Biology)
- The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models (Bioinform.)
- Community structure in social and biological networks (Proceedings of the National Academy of Sciences of the United States of America)
- WikiPathways: Pathway Editing for the People (PLoS Biology)
- Network-based classification of breast cancer metastasis
- The hallmarks of cancer (RNA Biology)
- Controlling the false discovery rate: a practical and powerful approach to multiple testing
- Modularity from fluctuations in random graphs and complex networks. (Physical review. E, Statistical, nonlinear, and soft matter physics)
Their papers
- Pathway Commons, a web resource for biological pathway data (2010) — 1,141 citations
- Automated Network Analysis Identifies Core Pathways in Glioblastoma (2010) — 345 citations
- The reactome pathway knowledgebase 2022 (2021) — 1,546 citations
- The Systems Biology Graphical Notation (2009) — 975 citations
- BioPAX – A community standard for pathway data sharing (2010) — 695 citations
- The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution (2020) — 482 citations