Itay Mayrose

Nature and Landscape Conservation · 2002–2023

A researcher in the Science corpus: 12 papers; trusts 28 researchers and is trusted by 9 researchers here, as inferred from the citation graph.

Subfields

• Nature and Landscape Conservation — 98 citations into it
• Molecular Biology — 94 citations into it; #3,905 of 17,773 by trust here, #5,550 by citations
• Ecology, Evolution, Behavior and Systematics — 62 citations into it
• Genetics — 60 citations into it
• Global and Planetary Change — 54 citations into it
• Plant Science — 48 citations into it
• Computational Biology & Bioinformatics — 38 citations into it
• Ecological Modeling — 32 citations into it

Whom Itay Mayrose trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Joseph Felsenstein
2. David T. Jones
3. Paul O. Lewis
4. Tal Pupko
5. Yoshiyuki Suzuki
6. John P. Huelsenbeck
7. Julie Dawn Thompson
8. William R. Taylor
9. Ziheng Yang
10. Janet M. Thornton

Who trusts Itay Mayrose overall

1. Haim Ashkenazy
2. John A. Capra
3. Devlina Chakravarty
4. Eric Martz
5. Julian Echave
6. Liat Rockah-Shmuel
7. Elana Erez
8. Tal Pupko
9. Adi Stern
10. Mona Singh

Papers from Itay Mayrose's perspective

Ordered by how strongly the researchers Itay Mayrose trusts endorse each paper. Same corpus, a different order for every researcher.

1. The Pfam protein families database
2. Basic local alignment search tool.
3. The Protein Data Bank.
4. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
5. The SWISS-PROT protein sequence data bank and its supplement TrEMBL
6. SCOP: a structural classification of proteins database for the investigation of sequences and structures.
7. Evolutionary trees from DNA sequences: A maximum likelihood approach (Journal of Molecular Evolution)
8. A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach.
9. MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
10. HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment

Their papers

• Comparison of site-specific rate-inference methods for protein sequences: empirical Bayesian methods are superior. (2004) — 452 citations
• ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures (2005) — 1,449 citations
• Rate4Site: an algorithmic tool for the identification of functional regions in proteins by surface mapping of evolutionary determinants within their homologues (2002) — 632 citations
• ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules (2016) — 2,910 citations
• ConSurf: Using Evolutionary Data to Raise Testable Hypotheses about Protein Function (2013) — 565 citations
• Using evolutionary data to make sense of macromolecules with a “face‐lifted” ConSurf (2023) — 350 citations
• Model selection may not be a mandatory step for phylogeny reconstruction (2019) — 329 citations
• TRY plant trait database - enhanced coverage and open access. (2019) — 1,771 citations
• Body sizes and diversification rates of lizards, snakes, amphisbaenians and the tuatara (2016) — 209 citations
• Clumpak: a program for identifying clustering modes and packaging population structure inferences across K (2015) — 3,064 citations
• The Chromosome Counts Database (CCDB) - a community resource of plant chromosome numbers. (2015) — 651 citations
• The frequency of polyploid speciation in vascular plants (2009) — 1,282 citations