David S. Goodsell
Molecular Biology · 1996–2022
A researcher in the Science corpus: 21 papers; trusts 10 researchers and is trusted by 49 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 256 citations into it; #1,880 of 17,773 by trust here, #1,241 by citations
- Materials Chemistry — 93 citations into it; #2,244 of 11,513 by trust here, #1,979 by citations
- Computational Biology & Bioinformatics — 81 citations into it
- Computational Theory and Mathematics — 81 citations into it; #1,436 of 12,182 by trust here, #341 by citations
- Spectroscopy — 50 citations into it
- Computational Chemistry & Drug Discovery — 36 citations into it; #158 of 425 by trust here, #285 by citations
- Infectious Diseases — 13 citations into it; #118 of 589 by trust here, #75 by citations
- Natural Language Processing — 7 citations into it
Whom David S. Goodsell trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Garrett M. Morris
- UniProt Consortium
- Ruth Huey
- S. Parasuraman
- Helen M. Berman
- Robert D. Finn
- Arthur J. Olson
- Peter W. Rose
Who trusts David S. Goodsell overall
- U. Parashar
- C. Hetényi
- Stefano Forli
- George M. Whitesides
- Preeti S. SAXENAa
- Diane Joseph-McCarthy
- Garrett M. Morris
- Jinn-Moon Yang
- D. van der Spoel
- Kuo-Chen Chou
Papers from David S. Goodsell's perspective
Ordered by how strongly the researchers David S. Goodsell trusts endorse each paper. Same corpus, a different order for every researcher.
- The Protein Data Bank.
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- The Protein Data Bank
- Basic local alignment search tool.
- The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data
- MODBASE: a database of annotated comparative protein structure models and associated resources
- Data growth and its impact on the SCOP database: new developments
- Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features
- The Pfam protein families database
- Computational drug design accommodating receptor flexibility: the relaxed complex scheme. (Journal of the American Chemical Society)
Their papers
- A semiempirical free energy force field with charge‐based desolvation (2007) — 2,152 citations
- The RCSB Protein Data Bank: views of structural biology for basic and applied research and education (2014) — 509 citations
- The RCSB Protein Data Bank: new resources for research and education (2012) — 532 citations
- Structural symmetry and protein function. (2000) — 924 citations
- The RCSB Protein Data Bank: redesigned web site and web services (2010) — 668 citations
- RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences (2020) — 1,313 citations
- The RCSB protein data bank: integrative view of protein, gene and 3D structural information (2016) — 1,037 citations
- AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility (2009) — 23,062 citations
- RCSB Protein Data Bank: Enabling biomedical research and drug discovery (2019) — 303 citations
- RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy (2018) — 1,101 citations
- Automated docking to multiple target structures: Incorporation of protein mobility and structural water heterogeneity in AutoDock (2002) — 455 citations
- RCSB Protein Data Bank: A Resource for Chemical, Biochemical, and Structural Explorations of Large and Small Biomolecules (2016) — 126 citations
- Virtual Screening with AutoDock: Theory and Practice (2010) — 643 citations
- Covalent docking using autodock: Two‐point attractor and flexible side chain methods (2016) — 222 citations
- AutoDockFR: Advances in Protein-Ligand Docking with Explicitly Specified Binding Site Flexibility (2015) — 580 citations
- Computational protein-ligand docking and virtual drug screening with the AutoDock suite (2016) — 2,356 citations
- RCSB Protein Data Bank (RCSB.org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning (2022) — 715 citations
- Evaluation of AlphaFold2 structures as docking targets (2022) — 78 citations
- The RCSB PDB “Molecule of the Month”: Inspiring a Molecular View of Biology (2015) — 108 citations
- Bionanotechnology: Lessons from Nature (2004) — 325 citations