Mariusz Popenda
Molecular Biology · 2012–2023
A researcher in the Science corpus: 6 papers; trusts 12 researchers and is trusted by 4 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 89 citations into it; #10,375 of 17,773 by trust here, #5,819 by citations
- Materials Chemistry — 32 citations into it
- Computational Biology & Bioinformatics — 18 citations into it
Whom Mariusz Popenda trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- D. Mathews
- Marc-André Parisien
- Peter Güntert
- Adam T. Zemla
- Nicholas I. Fisher
- Jessica S. Reuter
- Rhiju Das
- François Major
- Helen M. Berman
- Pawel Daniluk
Who trusts Mariusz Popenda overall
- Andrew M. Watkins
- Zhichao Miao
- Eric Westhof
- R. Rangan
- Andrey Krokhotin
- Jun Wang
- Rhiju Das
- Ryszard W. Adamiak
- Neocles Leontis
Papers from Mariusz Popenda's perspective
Ordered by how strongly the researchers Mariusz Popenda trusts endorse each paper. Same corpus, a different order for every researcher.
- RNAstructure: software for RNA secondary structure prediction and analysis (BMC Bioinformatics)
- Quantitative analysis of nucleic acid three-dimensional structures.
- Mfold web server for nucleic acid folding and hybridization prediction (Nucleic Acids Res.)
- Protein data bank
- The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data
- LGA: a method for finding 3D similarities in protein structures
- Tools for the automatic identification and classification of RNA base pairs (Nucleic Acids Res.)
- Rfam: updates to the RNA families database (Nucleic Acids Res.)
- The Protein Data Bank
- New metrics for comparing and assessing discrepancies between RNA 3D structures and models.
Their papers
- RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures (2015) — 197 citations
- RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers (2020) — 141 citations
- MCQ4Structures to compute similarity of molecule structures (2013) — 43 citations
- Automated 3D structure composition for large RNAs (2012) — 696 citations
- RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme (2017) — 197 citations
- RNA tertiary structure prediction using RNAComposer in CASP15 (2023) — 93 citations