Tsjerk A. Wassenaar
Molecular Biology · 2007–2021
A researcher in the Science corpus: 6 papers; trusts 1 researcher and is trusted by 2 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 87 citations into it; #13,302 of 17,773 by trust here, #7,384 by citations
Whom Tsjerk A. Wassenaar trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Who trusts Tsjerk A. Wassenaar overall
- Siewert-Jan Marrink
- Djurre H. De Jong
- Helgi I. Ingólfsson
- Valentina Corradi
- Jumin Lee
- Svetlana Baoukina
Papers from Tsjerk A. Wassenaar's perspective
Ordered by how strongly the researchers Tsjerk A. Wassenaar trusts endorse each paper. Same corpus, a different order for every researcher.
- WHAT IF: a molecular modeling and drug design program.
- SWISS-MODEL: an automated protein homology-modeling server
- CAPRI: A Critical Assessment of PRedicted Interactions (Proteins: Structure, Function, and Bioinformatics)
- Protein structure prediction and analysis using the Robetta server
- Modeller: generation and refinement of homology-based protein structure models.
- PRODRG: a tool for high-throughput crystallography of protein-ligand complexes.
- HADDOCK: a protein-protein docking approach based on biochemical or biophysical information.
- ProMate: a structure based prediction program to identify the location of protein-protein binding sites.
- Information-driven protein–DNA docking using HADDOCK: it is a matter of flexibility
- A multiscale coarse-graining method for biomolecular systems. (Journal of Physical Chemistry B)
Their papers
- HADDOCK versus HADDOCK: New features and performance of HADDOCK2.0 on the CAPRI targets (2007) — 578 citations
- Computational Lipidomics with insane: A Versatile Tool for Generating Custom Membranes for Molecular Simulations. (2015) — 1,062 citations
- Lipid organization of the plasma membrane. (2014) — 827 citations
- Improved Parameters for the Martini Coarse-Grained Protein Force Field. (2013) — 1,353 citations
- Martini 3: A General Purpose Force Field for Coarse-Grained Molecular Dynamics (2021) — 1,229 citations
- Going Backward: A Flexible Geometric Approach to Reverse Transformation from Coarse Grained to Atomistic Models. (2014) — 662 citations