Christophe Chipot

Molecular Biology · 2005–2020

A researcher in the Science corpus: 8 papers; trusts 9 researchers and is trusted by 8 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 65 citations into it; #16,098 of 17,773 by trust here, #2,535 by citations
• Atomic and Molecular Physics, and Optics — 55 citations into it; #2,774 of 7,135 by trust here, #4,284 by citations
• Materials Chemistry — 22 citations into it; #10,158 of 11,513 by trust here, #2,723 by citations
• Statistical and Nonlinear Physics — 21 citations into it; #4,805 of 10,127 by trust here, #5,625 by citations
• Spectroscopy — 12 citations into it

Whom Christophe Chipot trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Andrew Pohorille
2. Eric F Darve
3. Charles H. Bennett
4. Alexander D. MacKerell
5. Michael R. Shirts
6. Y. Sugita
7. Christopher Jarzynski

Who trusts Christophe Chipot overall

1. Wenbo Yu
2. Paulo J. M. Monteiro
3. Alexander D. MacKerell
4. James C. Gumbart
5. Guoqing Geng
6. P. Talkner
7. David L. Mobley

Papers from Christophe Chipot's perspective

Ordered by how strongly the researchers Christophe Chipot trusts endorse each paper. Same corpus, a different order for every researcher.

1. Good practices in free-energy calculations. (Journal of Physical Chemistry B)
2. Scalable Algorithms for Molecular Dynamics Simulations on Commodity Clusters (International Conference on Software Composition)
3. Calculating free energies using average force
4. Free energy calculation from steered molecular dynamics simulations using Jarzynski's equality
5. Equilibrium free-energy differences from nonequilibrium measurements: A master-equation approach
6. All-atom empirical potential for molecular modeling and dynamics studies of proteins.
7. Fast parallel algorithms for short-range molecular dynamics
8. Numerical Integration of the Cartesian Equations of Motion of a System with Constraints: Molecular Dynamics of n-Alkanes
9. A smooth particle mesh Ewald method
10. Replica Exchange with Solute Scaling: A more efficient version of Replica Exchange with Solute Tempering (REST2) (Journal of Physical Chemistry B)

Their papers

• Scalable molecular dynamics with NAMD (2005) — 16,410 citations
• Scalable molecular dynamics on CPU and GPU architectures with NAMD. (2020) — 2,675 citations
• Insights into the recognition and association of transmembrane α-helices. The free energy of α-helix dimerization in glycophorin A (2005) — 132 citations
• Standard binding free energies from computer simulations: What is the best strategy? (2012) — 316 citations
• The Adaptive Biasing Force Method: Everything You Always Wanted To Know but Were Afraid To Ask (2014) — 437 citations
• Thermodynamics of Deca-alanine Folding in Water (2014) — 48 citations
• Good practices in free-energy calculations. (2010) — 586 citations
• Free energy calculations : theory and applications in chemistry and biology (2007) — 488 citations