Sophie S. Abby
Molecular Biology · 2014–2015
A researcher in the Science corpus: 2 papers; trusts 2 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 31 citations into it
- Computational Biology & Bioinformatics — 7 citations into it
Whom Sophie S. Abby trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Sean R. Eddy
- Daniel H. Haft
- Steve L. Johnson
- Jeremy D. Selengut
- Robert D. Finn
- Rodolphe Barrangou
- Marco Punta
- Kira S. Makarova
- Robert C. Edgar
- Jaina Mistry
Papers from Sophie S. Abby's perspective
Ordered by how strongly the researchers Sophie S. Abby trusts endorse each paper. Same corpus, a different order for every researcher.
- TIGRFAMs: a protein family resource for the functional identification of proteins (Nucleic Acids Res.)
- The Pfam protein families database
- Hidden Markov model speed heuristic and iterative HMM search procedure
- A Guild of 45 CRISPR-Associated (Cas) Protein Families and Multiple CRISPR/Cas Subtypes Exist in Prokaryotic Genomes (PLoS Comput. Biol.)
- InterProScan: protein domains identifier (Nucleic Acids Res.)
- ProDom: Automated Clustering of Homologous Domains (Briefings Bioinform.)
- ProDom and ProDom-CG: tools for protein domain analysis and whole genome comparisons (Nucleic Acids Res.)
- Accelerated Profile HMM Searches
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- Recent improvements to the SMART domain-based sequence annotation resource (Nucleic Acids Res.)
Their papers
- MacSyFinder: A Program to Mine Genomes for Molecular Systems with an Application to CRISPR-Cas Systems (2014) — 344 citations
- Identification of protein secretion systems in bacterial genomes (2015) — 376 citations