Paul Murphy
Molecular Biology · 2003–2011
A researcher in the Science corpus: 3 papers; trusts 10 researchers and is trusted by 3 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 39 citations into it; #11,151 of 17,773 by trust here, #4,731 by citations
- Materials Chemistry — 26 citations into it; #9,073 of 11,513 by trust here, #4,660 by citations
- Computational Biology & Bioinformatics — 13 citations into it
Whom Paul Murphy trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- David Baker
- Carol A. Rohl
- Brian Kuhlman
- Adrian A. Canutescu
- Rhiju Das
- Philip Bradley
- K. Simons
- Charles E.M. Strauss
- Tanja Kortemme
- L. Looger
Who trusts Paul Murphy overall
Papers from Paul Murphy's perspective
Ordered by how strongly the researchers Paul Murphy trusts endorse each paper. Same corpus, a different order for every researcher.
- Native protein sequences are close to optimal for their structures.
- De novo protein design: fully automated sequence selection.
- Rosetta in CASP4: Progress in ab initio protein structure prediction (Proteins: Structure, Function, and Bioinformatics)
- Computational redesign of protein-protein interaction specificity (Nature Structural &Molecular Biology)
- Alternate states of proteins revealed by detailed energy landscape mapping
- Ab initio protein structure prediction of CASP III targets using ROSETTA
- Design of a Novel Globular Protein Fold with Atomic-Level Accuracy
- Modeling structurally variable regions in homologous proteins with rosetta
- Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and Bayesian scoring functions.
- Kemp elimination catalysts by computational enzyme design
Their papers
- RosettaScripts: A Scripting Language Interface to the Rosetta Macromolecular Modeling Suite (2011) — 614 citations
- Alteration of enzyme specificity by computational loop remodeling and design (2009) — 134 citations
- Rosetta predictions in CASP5: Successes, failures, and prospects for complete automation (2003) — 188 citations