Marta Szachniuk

Molecular Biology · 2012–2023

A researcher in the Science corpus: 8 papers; trusts 16 researchers and is trusted by 4 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 144 citations into it; #9,621 of 17,773 by trust here, #5,189 by citations
• Materials Chemistry — 56 citations into it
• Computational Biology & Bioinformatics — 37 citations into it

Whom Marta Szachniuk trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Marc-André Parisien
2. Adam T. Zemla
3. D. Mathews
4. Nicholas I. Fisher
5. Peter Güntert
6. Rhiju Das
7. Jessica S. Reuter
8. José Almeida Cruz
9. Pawel Daniluk
10. François Major

Who trusts Marta Szachniuk overall

1. Andrew M. Watkins
2. Zhichao Miao
3. Eric Westhof

Papers from Marta Szachniuk's perspective

Ordered by how strongly the researchers Marta Szachniuk trusts endorse each paper. Same corpus, a different order for every researcher.

1. Geometric nomenclature and classification of RNA base pairs.
2. Quantitative analysis of nucleic acid three-dimensional structures.
3. LGA: a method for finding 3D similarities in protein structures
4. RNAstructure: software for RNA secondary structure prediction and analysis (BMC Bioinformatics)
5. Protein data bank
6. The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data
7. New metrics for comparing and assessing discrepancies between RNA 3D structures and models.
8. Mfold web server for nucleic acid folding and hybridization prediction (Nucleic Acids Res.)
9. Basic local alignment search tool.
10. ModeRNA: a tool for comparative modeling of RNA 3D structure

Their papers

• RNA-Puzzles toolkit: a computational resource of RNA 3D structure benchmark datasets, structure manipulation, and evaluation tools (2019) — 76 citations
• RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures (2015) — 197 citations
• RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers (2020) — 141 citations
• MCQ4Structures to compute similarity of molecule structures (2013) — 43 citations
• Automated 3D structure composition for large RNAs (2012) — 696 citations
• RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme (2017) — 197 citations
• New prediction categories in CASP15 (2023) — 53 citations
• RNA tertiary structure prediction using RNAComposer in CASP15 (2023) — 93 citations