Bong-Hyun Kim

Molecular Biology · 2008–2014

A researcher in the Science corpus: 9 papers; trusts 33 researchers and is trusted by 14 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 134 citations into it; #2,631 of 17,773 by trust here, #3,019 by citations
• Materials Chemistry — 51 citations into it; #3,582 of 11,513 by trust here, #4,939 by citations
• Computational Biology & Bioinformatics — 49 citations into it; #633 of 660 by trust here, #462 by citations
• Evaluation & Benchmarks — 7 citations into it

Whom Bong-Hyun Kim trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Johannes Söding
2. Stephen F. Altschul
3. Alexey G. Murzin
4. Nick V. Grishin
5. Liisa Holm
6. Hua Cheng
7. Steven E. Brenner
8. Chih-Wei Hsu
9. Yang Zhang
10. Robert C. Edgar

Who trusts Bong-Hyun Kim overall

1. Hua Cheng
2. Lisa N. Kinch
3. Erik S. Wright
4. Kazutaka Katoh
5. R. D. Schaeffer
6. Nick V. Grishin
7. Shuoyong Shi
8. Ruslan I. Sadreyev
9. Daron M. Standley
10. Gyu Rie Lee

Papers from Bong-Hyun Kim's perspective

Ordered by how strongly the researchers Bong-Hyun Kim trusts endorse each paper. Same corpus, a different order for every researcher.

1. Protein structure comparison by alignment of distance matrices.
2. Basic local alignment search tool.
3. SCOP: a structural classification of proteins database for the investigation of sequences and structures.
4. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
5. The Pfam protein families database
6. Amino acid substitution matrices from protein blocks.
7. Protein structure alignment by incremental combinatorial extension (CE) of the optimal path.
8. Data growth and its impact on the SCOP database: new developments
9. TM-align: a protein structure alignment algorithm based on the TM-score
10. The Protein Data Bank.

Their papers

• Structure prediction for CASP8 with all-atom refinement using Rosetta (2009) — 496 citations
• ECOD: An Evolutionary Classification of Protein Domains (2014) — 391 citations
• Analysis of CASP8 targets, predictions and assessment methods (2009) — 36 citations
• PROMALS3D: a tool for multiple protein sequence and structure alignments (2008) — 1,296 citations
• HorA web server to infer homology between proteins using sequence and structural similarity (2009) — 14 citations
• Discrimination between distant homologs and structural analogs: lessons from manually constructed, reliable data sets. (2008) — 26 citations
• ZDOCK server: interactive docking prediction of protein-protein complexes and symmetric multimers (2014) — 1,649 citations
• Factorbook.org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium (2012) — 297 citations
• COMPASS server for homology detection: improved statistical accuracy, speed and functionality (2009) — 27 citations