R. D. Schaeffer
Molecular Biology · 2014–2021
A researcher in the Science corpus: 5 papers; trusts 19 researchers and is trusted by 7 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 85 citations into it; #6,765 of 17,773 by trust here, #6,685 by citations
- Computational Biology & Bioinformatics — 37 citations into it; #636 of 660 by trust here, #462 by citations
- Materials Chemistry — 31 citations into it
Whom R. D. Schaeffer trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Yang Zhang
- Johannes Söding
- Hua Cheng
- Jeffrey Skolnick
- Stephen F. Altschul
- Antonina Andreeva
- X. Bai
- Lisa N. Kinch
- Nick V. Grishin
- Robert D. Finn
Who trusts R. D. Schaeffer overall
- Joe G. Greener
- Isak Johansson-Åkhe
- Björn Wallner
- Lisa N. Kinch
- Felix Gabler
- Shaun M. Kandathil
- Claudio Mirabello
- David T. Jones
- Seung-Zin Nam
Papers from R. D. Schaeffer's perspective
Ordered by how strongly the researchers R. D. Schaeffer trusts endorse each paper. Same corpus, a different order for every researcher.
- Protein structure comparison by alignment of distance matrices.
- Data growth and its impact on the SCOP database: new developments
- TM-align: a protein structure alignment algorithm based on the TM-score
- Protein data bank
- SCOPe: Structural Classification of Proteins—extended, integrating SCOP and ASTRAL data and classification of new structures
- Basic local alignment search tool.
- SCOP2 prototype: a new approach to protein structure mining
- ECOD: An Evolutionary Classification of Protein Domains
- The Pfam protein families database: towards a more sustainable future
- MUSCLE: multiple sequence alignment with high accuracy and high throughput.
Their papers
- ECOD: An Evolutionary Classification of Protein Domains (2014) — 391 citations
- ECOD: new developments in the evolutionary classification of domains (2016) — 90 citations
- CASP 11 Target Classification (2016) — 35 citations
- Searching ECOD for homologous domains by sequence and structure (2018) — 6 citations
- Topology Evaluation of Models for Difficult Targets in the 14th Round of the Critical Assessment of Protein Structure Prediction (CASP14) (2021) — 43 citations