Hiroyuki Toh

Molecular Biology · 2001–2010

A researcher in the Science corpus: 9 papers; trusts 50 researchers and is trusted by 122 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 85 citations into it; #182 of 17,773 by trust here, #1,914 by citations
• Computational Biology & Bioinformatics — 25 citations into it
• Materials Chemistry — 14 citations into it; #3,256 of 11,513 by trust here, #9,037 by citations
• Artificial Intelligence — 7 citations into it; #10,292 of 35,345 by trust here, #23,731 by citations

Whom Hiroyuki Toh trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Robert C. Edgar
2. Kazutaka Katoh
3. Cédric Notredame
4. Desmond G. Higgins
5. Julie Dawn Thompson
6. Liisa Holm
7. Timo Lassmann
8. Bjarne Knudsen
9. Paul P. Gardner
10. K. Kuma

Who trusts Hiroyuki Toh overall

1. Kazutaka Katoh
2. Daron M. Standley
3. D. Reid
4. Morgan N. Price
5. John Rozewicki
6. Jimin Pei
7. Kevin J. Liu
8. Timo Lassmann
9. Benjamin P. Blackburne
10. Haim Ashkenazy

Papers from Hiroyuki Toh's perspective

Ordered by how strongly the researchers Hiroyuki Toh trusts endorse each paper. Same corpus, a different order for every researcher.

1. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.
2. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
3. MUSCLE: multiple sequence alignment with high accuracy and high throughput.
4. The Pfam protein families database
5. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
6. T-Coffee: A novel method for fast and accurate multiple sequence alignment.
7. Amino acid substitution matrices from protein blocks.
8. Identification of common molecular subsequences.
9. MUSCLE: a multiple sequence alignment method with reduced time and space complexity
10. ProbCons: Probabilistic consistency-based multiple sequence alignment. (Genome Research)

Their papers

• MAFFT version 5: improvement in accuracy of multiple sequence alignment (2005) — 4,970 citations
• PartTree: an algorithm to build an approximate tree from a large number of unaligned sequences (2007) — 126 citations
• Recent developments in the MAFFT multiple sequence alignment program (2008) — 3,645 citations
• Multiple alignment of DNA sequences with MAFFT. (2009) — 1,420 citations
• Detecting local structural similarity in proteins by maximizing number of equivalent residues (2004) — 27 citations
• ASH structure alignment package: Sensitivity and selectivity in domain classification (2007) — 43 citations
• Parallelization of the MAFFT multiple sequence alignment program (2010) — 162 citations
• Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework (2008) — 602 citations
• Expansion of the zinc metallo‐hydrolase family of the β‐lactamase fold (2001) — 282 citations