Peter D. Karp

Molecular Biology · 2000–2019

A researcher in the Science corpus: 23 papers; trusts 11 researchers and is trusted by 22 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 155 citations into it; #1,869 of 17,773 by trust here, #778 by citations

Whom Peter D. Karp trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Minoru Kanehisa
2. David Weininger
3. Lincoln D. Stein
4. Suzanne M. Paley
5. Susumu Goto
6. Amos Bairoch
7. Rachel A. Drysdale
8. Kim D. Pruitt
9. Pedro Romero
10. Ron Caspi

Who trusts Peter D. Karp overall

1. Ron Caspi
2. Lukas A. Mueller
3. Bernhard O. Palsson
4. Pedro Romero
5. Ines Thiele
6. Hongwu Ma
7. Jennie L. Reed
8. Maxime Durot
9. Seung Yon Rhee
10. Suzanne M. Paley

Papers from Peter D. Karp's perspective

Ordered by how strongly the researchers Peter D. Karp trusts endorse each paper. Same corpus, a different order for every researcher.

1. Integration of biological networks and gene expression data using Cytoscape (Nature Protocols)
2. From genomics to chemical genomics: new developments in KEGG (Nucleic Acids Res.)
3. Data, information, knowledge and principle: back to metabolism in KEGG (Nucleic Acids Res.)
4. Database resources of the National Center for Biotechnology Information: update
5. KEGG: Kyoto Encyclopedia of Genes and Genomes (Nucleic Acids Res.)
6. WikiPathways: Pathway Editing for the People (PLoS Biology)
7. Textpresso: An Ontology-Based Information Retrieval and Extraction System for Biological Literature
8. KEGG Atlas mapping for global analysis of metabolic pathways (Nucleic Acids Res.)
9. The KEGG databases at GenomeNet (Nucleic Acids Res.)
10. EcoCyc: a comprehensive database resource for Escherichia coli (Nucleic Acids Res.)

Their papers

• The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases (2009) — 2,136 citations
• A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information (2007) — 1,519 citations
• EcoCyc: fusing model organism databases with systems biology (2012) — 614 citations
• MetaCyc: a multiorganism database of metabolic pathways and enzymes (2005) — 495 citations
• Expansion of the BioCyc collection of pathway/genome databases to 160 genomes (2005) — 665 citations
• The EcoCyc Database (2002) — 562 citations
• EcoCyc: A comprehensive view of Escherichia coli biology (2008) — 407 citations
• Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology (2010) — 652 citations
• The EcoCyc and MetaCyc databases (2000) — 322 citations
• The Pathway Tools software (2002) — 691 citations
• The MetaCyc Database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases (2007) — 777 citations
• Computational prediction of human metabolic pathways from the complete human genome (2004) — 558 citations
• EcoCyc: a comprehensive database resource for Escherichia coli (2004) — 781 citations
• The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases (2015) — 803 citations
• The MetaCyc database of metabolic pathways and enzymes - a 2019 update (2019) — 1,147 citations
• BioPAX – A community standard for pathway data sharing (2010) — 695 citations
• EcoCyc: a comprehensive database of Escherichia coli biology (2010) — 523 citations
• The MetaCyc Database (2002) — 452 citations
• The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases (2013) — 609 citations
• The MetaCyc database of metabolic pathways and enzymes (2017) — 846 citations