Haruki Nakamura

Molecular Biology · 2003–2017

A researcher in the Science corpus: 10 papers; trusts 14 researchers and is trusted by 43 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 62 citations into it; #924 of 17,773 by trust here, #2,170 by citations
• Materials Chemistry — 42 citations into it; #526 of 11,513 by trust here, #2,825 by citations
• Computational Biology & Bioinformatics — 24 citations into it; #116 of 660 by trust here, #203 by citations
• Evaluation & Benchmarks — 9 citations into it; #606 of 3,147 by trust here, #719 by citations

Whom Haruki Nakamura trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Helen M. Berman
2. Liisa Holm
3. Alexey G. Murzin
4. Adam T. Zemla
5. David A. Lee
6. Hector Garcia-Molina
7. Rachel Kolodny
8. Steven E. Brenner
9. Ilya N. Shindyalov
10. Christopher Sander

Who trusts Haruki Nakamura overall

1. Kazutaka Katoh
2. Torsten Schwede
3. Abdo A. Elfiky
4. Daron M. Standley
5. G. Bunkoczi
6. Akira R. Kinjo
7. John Rozewicki
8. Helen M. Berman
9. Robbie P. Joosten
10. Stephen K. Burley

Papers from Haruki Nakamura's perspective

Ordered by how strongly the researchers Haruki Nakamura trusts endorse each paper. Same corpus, a different order for every researcher.

1. SCOP: a structural classification of proteins database for the investigation of sequences and structures.
2. The Universal Protein Resource (UniProt)
3. The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data
4. PDBe: Protein Data Bank in Europe
5. Announcing the worldwide Protein Data Bank
6. Comprehensive evaluation of protein structure alignment methods: scoring by geometric measures. (Journal of Molecular Biology)
7. Amino acid substitution matrices from protein blocks.
8. Protein structure alignment by incremental combinatorial extension (CE) of the optimal path.
9. Selection of representative protein data sets
10. PDBe: improved accessibility of macromolecular structure data from PDB and EMDB

Their papers

• Announcing the worldwide Protein Data Bank (2003) — 2,921 citations
• The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data (2006) — 1,102 citations
• Outcome of the First wwPDB Hybrid/Integrative Methods Task Force Workshop (2015) — 175 citations
• Protein Data Bank (PDB): The Single Global Macromolecular Structure Archive (2017) — 974 citations
• Detecting local structural similarity in proteins by maximizing number of equivalent residues (2004) — 27 citations
• ASH structure alignment package: Sensitivity and selectivity in domain classification (2007) — 43 citations
• Zc3h12a is an RNase essential for controlling immune responses by regulating mRNA decay (2009) — 671 citations
• Protein Data Bank Japan (PDBj): maintaining a structural data archive and resource description framework format (2011) — 130 citations
• Comprehensive structural classification of ligand-binding motifs in proteins. (2008) — 51 citations
• Community‐wide evaluation of methods for predicting the effect of mutations on protein–protein interactions (2013) — 102 citations