Eduardo P. C. Rocha
Molecular Biology · 2009–2018
A researcher in the Science corpus: 7 papers; trusts 5 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 87 citations into it
- Genetics — 45 citations into it
- Computational Biology & Bioinformatics — 12 citations into it
- Plant Science — 11 citations into it
Whom Eduardo P. C. Rocha trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Papers from Eduardo P. C. Rocha's perspective
Ordered by how strongly the researchers Eduardo P. C. Rocha trusts endorse each paper. Same corpus, a different order for every researcher.
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- TIGRFAMs: a protein family resource for the functional identification of proteins (Nucleic Acids Res.)
- A Guild of 45 CRISPR-Associated (Cas) Protein Families and Multiple CRISPR/Cas Subtypes Exist in Prokaryotic Genomes (PLoS Comput. Biol.)
- CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies. (Microbiology)
- Hidden Markov model speed heuristic and iterative HMM search procedure
- A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. (Systematic Biology)
- MUSCLE: multiple sequence alignment with high accuracy and high throughput.
- InterProScan: protein domains identifier (Nucleic Acids Res.)
- Accelerated Profile HMM Searches
- ProDom: Automated Clustering of Homologous Domains (Briefings Bioinform.)
Their papers
- Organised Genome Dynamics in the Escherichia coli Species Results in Highly Diverse Adaptive Paths (2009) — 1,272 citations
- CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins (2018) — 1,362 citations
- MacSyFinder: A Program to Mine Genomes for Molecular Systems with an Application to CRISPR-Cas Systems (2014) — 344 citations
- Mobility of Plasmids (2010) — 1,075 citations
- Uncovering Listeria monocytogenes hypervirulence by harnessing its biodiversity (2016) — 621 citations
- Whole genome-based population biology and epidemiological surveillance of Listeria monocytogenes (2016) — 600 citations
- Identification of protein secretion systems in bacterial genomes (2015) — 376 citations