Blake A. Simmons

Biomedical Engineering · 2004–2018

A researcher in the Science corpus: 16 papers; trusts 5 researchers and is trusted by 5 researchers here, as inferred from the citation graph.

Subfields

Whom Blake A. Simmons trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

  1. Robert C. Edgar
  2. Sean R. Eddy

Who trusts Blake A. Simmons overall

  1. Javier Tamames
  2. G. Uritskiy
  3. Yong-xin Liu

Papers from Blake A. Simmons's perspective

Ordered by how strongly the researchers Blake A. Simmons trusts endorse each paper. Same corpus, a different order for every researcher.

  1. Community structure and metabolism through reconstruction of microbial genomes from the environment (Nature)
  2. MUSCLE: multiple sequence alignment with high accuracy and high throughput.
  3. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics (Nucleic Acids Res.)
  4. Use of simulated data sets to evaluate the fidelity of metagenomic processing methods (Nature Methods)
  5. A core gut microbiome in obese and lean twins (Nature)
  6. Accelerated Profile HMM Searches
  7. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. (Molecular biology and evolution)
  8. The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes
  9. Tackling soil diversity with the assembly of large, complex metagenomes
  10. Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

Their papers