Jared Adolf-Bryfogle
Molecular Biology · 2016–2021
A researcher in the Science corpus: 7 papers; trusts 12 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 387 citations into it
- Materials Chemistry — 196 citations into it
- Radiology, Nuclear Medicine and Imaging — 74 citations into it
- Computational Biology & Bioinformatics — 48 citations into it
Whom Jared Adolf-Bryfogle trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Rhiju Das
- Roland L. Dunbrack
- David Baker
- Michael D. Tyka
- Andrew Leaver-Fay
- Robert J. Pantazes
- Maxim V. Shapovalov
- Adrian A. Canutescu
- Brian D. Weitzner
- Cyrus Chothia
Who trusts Jared Adolf-Bryfogle overall
Papers from Jared Adolf-Bryfogle's perspective
Ordered by how strongly the researchers Jared Adolf-Bryfogle trusts endorse each paper. Same corpus, a different order for every researcher.
- Alternate states of proteins revealed by detailed energy landscape mapping
- A flexible docking approach for prediction of T cell receptor–peptide–MHC complexes
- Modeling T cell receptor recognition of CD1-lipid and MR1-metabolite complexes
- T-Cell Transfer Therapy Targeting Mutant KRAS in Cancer
- Systematic Comparison of Amber and Rosetta Energy Functions for Protein Structure Evaluation.
- Repurposing Citizen Science Games as Software Tools for Professional Scientists
- Systematic Analysis of Helical Protein Interfaces Reveals Targets for Synthetic Inhibitors
- Can Self-Inhibitory Peptides be Derived from the Interfaces of Globular Protein-Protein Interactions?
- Comprehensive Analysis of Loops at Protein-Protein Interfaces for Macrocycle Design
- Efficient Sampling of Protein Conformational Space Using Fast Loop Building and Batch Minimization on Highly Parallel Computers
Their papers
- Macromolecular modeling and design in Rosetta: recent methods and frameworks (2020) — 783 citations
- Residue-Centric Modeling and Design of Saccharide and Glycoconjugate Structures (2016) — 46 citations
- Automatically fixing errors in glycoprotein structures with Rosetta (2018) — 110 citations
- Modeling and docking antibody structures with Rosetta (2017) — 253 citations
- Growing Glycans in Rosetta: Accurate de novo glycan modeling, density fitting, and rational sequon design (2021) — 29 citations
- Better together: Elements of successful scientific software development in a distributed collaborative community (2020) — 37 citations
- RosettaAntibodyDesign (RAbD): A general framework for computational antibody design (2017) — 233 citations