David Páez-Espino
Ecology · 2015–2020
A researcher in the Science corpus: 7 papers; trusts 1 researcher and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Ecology — 91 citations into it
- Plant Science — 27 citations into it
Whom David Páez-Espino trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Papers from David Páez-Espino's perspective
Ordered by how strongly the researchers David Páez-Espino trusts endorse each paper. Same corpus, a different order for every researcher.
- Community structure and metabolism through reconstruction of microbial genomes from the environment (Nature)
- The Pfam protein families database
- The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST) (Nucleic Acids Res.)
- High-throughput generation, optimization and analysis of genome-scale metabolic models (Nature Biotechnology)
- The COG database: a tool for genome-scale analysis of protein functions and evolution
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- IMG 4 version of the integrated microbial genomes comparative analysis system (Nucleic Acids Res.)
- Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
- ModelFinder: Fast Model Selection for Accurate Phylogenetic Estimates
- Interactive Tree Of Life (iTOL) v4: recent updates and new developments (Nucleic Acids Res.)
Their papers
- 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life (2017) — 243 citations
- A genomic catalog of Earth’s microbiomes (2020) — 743 citations
- Uncovering Earth’s virome (2016) — 993 citations
- The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4) (2015) — 308 citations
- Programmed DNA destruction by miniature CRISPR-Cas14 enzymes (2018) — 1,049 citations
- IMG/VR v3: an integrated ecological and evolutionary framework for interrogating genomes of uncultivated viruses (2020) — 296 citations
- Minimum Information about an Uncultivated Virus Genome (MIUViG) (2018) — 644 citations