Generalized born model with a simple smoothing function

By Wonpil Im, Michael S. Lee, Charles L. Brooks III. Journal of Computational Chemistry, 2003

637 citations recorded by the source corpus.

Subfields: Atomic and Molecular Physics, and Optics, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/fd18b104ade090f78c9dab5b424a30d7736968ac

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Atomic and Molecular Physics, and Optics

1. Jeffrey J. Gray
2. Yixiang X. Cao

In Molecular Biology

1. Rebecca F. Alford
2. Kai Zhu
3. Robert Abel
4. Jeffrey J. Gray
5. Patrick J. Fleming
6. Richard A. Friesner
7. K. Fleming
8. Ben M. Webb

Citations in the corpus

• The VSGB 2.0 model: A next generation energy model for high resolution protein structure modeling (2011, background): “…included fitting generalized Born models to Poisson–Boltzmann (PB) results (note that the PB model itself has to be parameterized in some fashion),20,21 exploring performance in the folding of small proteins,22,23 and comparisons with explicit solvent simulations.24 ,25 The present work is…”
• Protein Structure Prediction and Design in a Biologically Realistic Implicit Membrane. (2020, background): “To reduce computational cost, the generalized Born (GB) approximation of the PB equation treats atoms as charged spheres (24).”