ATSAS 2.1, a program package for small‐angle scattering data analysis

By P. Konarev, M. Petoukhov, V. Volkov, Dmitri I. Svergun. 2006

609 citations recorded by the source corpus.

Subfields: Materials Chemistry, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/fac84b4491a13ded3c15975d639ebdee74d184cf

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Citations in the corpus

ATSAS 2.8: a comprehensive data analysis suite for small-angle scattering from macromolecular solutions (2017, methodology): “Finally, BODIES may be employed to generate DAMs of the geometrical objects it supports.”
ATSAS 2.1 – towards automated and web-supported small-angle scattering data analysis (2007, methodology): “A recently added option to run DAMMIN in a batch mode from the command line (Konarev et al., 2006) allowed us to implement a simple web interface for launching the program re- s226 Maxim V. Petoukhov et al. New features of ATSAS 2.1 J. Appl.”
Structural insights into RNA recognition by RIG-I (2011, positive): “All data analysis and calculations were performed by using the ATSAS software suite (Konarev et al., 2006).”
Reduction and analysis of SANS and USANS data using IGOR Pro (2006, methodology): “The reduction and analysis capabilities of this package are similar in function to other programs, such as FISH (Heenan, 1999), Grasp (Dewhurst, 2002) and ATSAS (Konarev et al., 2006), in providing a convenient interface for both reduction and analysis of experimental data.”
ATP hydrolysis by the viral RNA sensor RIG-I prevents unintentional recognition of self-RNA (2015, methodology): “The data was processed using PRIMUS from the ATSAS package (Konarev et al., 2006) and the radius of gyration was determined by Guinier plot [ln I(s) versus s2] analysis obeying the Guinier approximation for globular proteins (s x Rg 1.3).”
Structure of Actin-related protein 8 and its contribution to nucleosome binding (2012, methodology): “Data were processed with the ATSAS package (37) and Guinier analysis yielded a radius of gyration Rg= 3.”
DAMMIF, a program for rapid ab-initio shape determination in small-angle scattering (2009, positive): “2), to parallelize other CPU-intensive programs from the ATSAS package (Konarev et al., 2006) that employ SA for model building in small-angle scattering.”
Upgrade of the small-angle X-ray scattering beamline X33 at the European Molecular Biology Laboratory, Hamburg (2007, methodology): “Novel data analysis methods developed for solution scattering during recent years (Svergun & Koch, 2003; Petoukhov & Svergun, 2003; Konarev et al., 2006) have attracted a growing number of users to the beamline.”
Scatter: software for the analysis of nano‐ and mesoscale small‐angle scattering (2010, background): “…if the experimental configuration (wavelength, sample– detector distance, beam position) is fixed, which is often the case for in-situ time-resolved experiments, modeling and fitting could be performed sequentially for a large series of files without requiring user attention (Konarev et al., 2006).”
New developments in the ATSAS program package for small-angle scattering data analysis (2012, positive): “Among the publicly available packages, ATSAS (Konarev et al., 2006; Petoukhov et al., 2007) is perhaps the most comprehensive collection of tools covering the major data manipulation and interpretation tasks.”