kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome

By Shea N. Gardner, T. Slezak, Barry G. Hall. Bioinform., 2015

569 citations recorded by the source corpus.

Subfields: Genetics, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/f367b8235a8b5d78ca3f0ce0608e28dace22736c

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Genetics

1. Andrzej Zielezinski
2. W. Karłowski
3. Jonas S. Almeida
4. Susana Vinga

In Molecular Biology

1. Andrzej Zielezinski
2. W. Karłowski
3. Jonas S. Almeida
4. Susana Vinga
5. Nicolas J.-B. Brunel

Citations in the corpus

• Alignment-free sequence comparison: benefits, applications, and tools (2017, methodology): “Assembly and alignment-free phylogenetic tools are already available on the market (AAF [78], NGS-MC [79], and kSNP [80, 81]) and although algo-rithmically different (e.g., based on single-nucleotide polymorphism calls or various dissimilarity measures), all of them are capable of phylogeny…”