proovread: large-scale high-accuracy PacBio correction through iterative short read consensus
By Thomas Hackl, Rainer Hedrich, Jörg Schultz, Frank Förster. Bioinform., 2014
456 citations recorded by the source corpus.
Subfields: Genetics, Molecular Biology
View Paper: https://www.semanticscholar.org/paper/ee0a2d57ce29dc0b0f0c1e55ff7557dc2ad9fa98
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In Genetics
In Molecular Biology
- Adam M. Phillippy
- Sergey Koren
- Christoph Bleidorn
- Brian Walenz
- Konstantin Berlin
- Jason Rafe Miller
- Nicholas H. Bergman
- Heng Li
Citations in the corpus
- Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation (2016, methodology): “Hybrid methods use single-molecule reads to reconstruct the long-range structure of the genome, but rely on complementary short reads for accurate base calls (Koren et al. 2012; Hackl et al. 2014; Lee et al. 2014; Salmela and Rivals 2014; Antipov et al. 2016; Ye et al. 2016).”
- Third generation sequencing: technology and its potential impact on evolutionary biodiversity research (2016, background): “The virus genomes of 14 patients in Guinea (West Africa) could be completely sequenced within 12 days, and in one case it took only 48 hours after sample collection (Hayden, 2015).”
- Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis (2017, unknown): “32 – 34).”