On-the-fly string method for minimum free energy paths calculation
By Luca Maragliano, Eric Vanden-Eijnden. 2007
169 citations recorded by the source corpus.
Subfields: Atomic and Molecular Physics, and Optics, Molecular Biology
View Paper: https://www.semanticscholar.org/paper/e1617fae4842549a36a4d32d5111129dec3b2b85
How researchers see this paper
The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.
In Atomic and Molecular Physics, and Optics
In Molecular Biology
Citations in the corpus
- Enhanced Sampling in Molecular Dynamics Using Metadynamics, Replica-Exchange, and Temperature-Acceleration (2013, methodology): “In contrast, in the on-the-fly variant of string method in CVs, the friction on the zs’s is set high enough to make the effective averaging of the forces approach the true mean forces, and the z updates occur in lockstep with the x updates of the MD system [232].”
- The heterogeneous multiscale method* (2012, unknown): “…especially handy in situations where the values taken by the fast variables are constrained by the slow variables, which arises in molecular dynamics simulations, for example (for applications in this context see, e.g., Maragliano and Vanden-Eijnden (2006, 2007), Abrams and Vanden-Eijnden (2010)).”