Molecular data and the evolutionary history of dinoflagellates

By Juan F. Saldarriagaa, Max’’ Taylora, Thomas Cavalier-Smithc, Susanne Menden-Deuerd, Patrick J. Keelinga. 2004

237 citations recorded by the source corpus.

Subfields: Ecology, Molecular Biology, Oceanography

View Paper: https://www.semanticscholar.org/paper/dbf20c231db6e200b5df3912038a3802957f721d

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Citations in the corpus

Azadinium spinosum gen. et sp. nov. (Dinophyceae) identified as a primary producer of azaspiracid toxins (2009, background): “Azadinium spinosum was separated from all other groups, even when the branching order of groups such as the Gymnodiniales, Peridiniales, and Prorocentrales (GPP species [Saldarriaga et al , 2004 ) could not be resolved in the analysis ( Fig.”
RECOGNIZING DINOFLAGELLATE SPECIES USING ITS rDNA SEQUENCES 1 (2007, background): “These genes can be PCRamplified and sequenced in conjunction with the ITS region and contain variable domains that are phylogenetically informative (Scholin et al. 1995, Litaker et al. 1999, Jorgensen et al. 2004, Ordas et al. 2004, Saldarriaga et al. 2004 ).”
Diversity and Ecology of Eukaryotic Marine Phytoplankton (2012, background): “The Karenia/Karlodinium clade separates from other gymnodinioid clades (e.g. Akashiwo, Gymnodinium, Amphidinium clades) in both 18S and 28S rRNA gene phylogenies (Murray, Jorgensen, Ho, Patterson, & Jermilin, 2005; Saldarriaga et al., 2004).”
Protist diversity along a salinity gradient in a coastal lagoon (2015, result): “Similar to the results of a previous study (Mangot et al. 2013) a good portion of dinoflagellate reads could not be identified further because of the poor resolution of the 18S rRNA gene for this class (Saldarriaga et al. 2004, Logares et al. 2007).”
Genetic diversity and habitats of two enigmatic marine alveolate lineages (2006, result): “These results contradict several previous studies that placed the enigmatic dinoflagellate Noctiluca scintillans at a more basal position than Groups I and II (Moon-van der Staay et al. 2001, Leander et al. 2003a, Berney et al. 2004, Saldarriaga et al. 2004, Taylor 2004).”
Pigment-based chloroplast types in dinoflagellates (2012, methodology): “Saldarriaga et al. (2004) proposed a scheme of the evolutionary history of dinoflagellates based on molecular trees of concatenated nuclear genes, morphological and palaeontological information.”
The globally distributed genus Alexandrium: multifaceted roles in marine ecosystems and impacts on human health (2012, background): “Molecular phylogenetic analyses – mostly carried out on genes of the ribosomal RNA (rDNA) in unicellular eukaryotes (including dinoflagellates) – confirmed that Alexandrium belongs to the Gonyaulacales (e.g., Saldarriaga et al., 2004).”
The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing (2014, background): “(D) Comparison of currently available complete genomes and MMETSP transcriptomes by Class for two diverse and well-studied groups of algae, prasinophytes [14] and dinoflagellates [15,16].”
WOLOSZYNSKIA HALOPHILA (BIECHELER) COMB. NOV.: A BLOOM‐FORMING COLD‐WATER DINOFLAGELLATE CO‐OCCURRING WITH SCRIPPSIELLA HANGOEI (DINOPHYCEAE) IN THE BALTIC SEA 1 (2005, background): “Daugbjerg et al. (2000) and Saldarriaga et al. (2004) demonstrated the distinctiveness of W. pseudopalustris from other athecate taxa related to the type species of the genus Gymnodinium.”
Crypthecodinium cohnii with emphasis on DHA production: a review (2009, unknown): “The theca is contained in relatively few alveoli with a pattern that can be determined (thecal plate tabulation) (Saldarriaga et al. 2004) and used for taxonomic purposes (Parrow et al.”