A model-based method for identifying species hybrids using multilocus genetic data.

By Eric C. Anderson, Elizabeth A. Thompson. Genetics, 2002

1,517 citations recorded by the source corpus.

View Paper: https://www.semanticscholar.org/paper/db076695c7681916d9cadbeade939bd0578287f3

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Citations in the corpus

Introgression of crop alleles into wild or weedy populations (2013, background): “The Bayesian NewHybrids program (Anderson & Thompson 2002) revealed that some of these introgressants were the result of several generations of selfing from either an F1 or a BC1 ancestor, consistent with how introgression should proceed for such highly selfing plants.”
A review of methods for discrimination of honey bee populations as applied to European beekeeping (2011, methodology): “To test for hybridisation on an individual basis, a Bayesian framework of model-based clustering is used (Anderson and Thompson, 2002).”
Beyond FST: Analysis of population genetic data for conservation (2004, background): “…that have seen recent advances based on maximum likelihood and/or Bayesian inference methods (e.g., relatedness (Milligan 2003), parentage calculations (Emery et al. 2001; reviewed by Jones and Ardren 2003), hybridization/admixture analyses (Anderson and Thompson 2002; Randi and Lucchini 2002)).”
Bayesian inference of recent migration rates using multilocus genotypes. (2003, methodology): “Commonly used indirect tain 1997; Pritchard et al. 2000) or hybrids betweenestimators of gene flow, such as 4Nem 1/FST 1, are species (Anderson and Thompson 2002) and assigningderived on the basis of simplified models of population individuals of unknown population affinity to potentialstructure…”
Molecular analysis of hybridisation between wild and domestic cats (Felis silvestris) in Portugal: implications for conservation (2008, methodology): “…clustering procedure described by Pritchard et al. (2000) and recently updated in STRUCTURE 2.1 (Falush et al. 2003); (ii) the method developed by Anderson and Thompson (2002) and performed in NEWHYBRIDS and (iii) a model-based software described by Wilson and Rannala (2003) and carried out in…”
Informativeness of genetic markers for inference of ancestry. (2003, background): “…across the parameter space Pairwise Kullback-Leibler divergence c (Brenner 1998; p p 1j 2j N ͸ p log ϩ p log 1j 2j jp1 p p 2j 1j Smith et al. 2001; Anderson and Thompson 2002) Provides a natural measure, for , of average K p 2 potential for assignment of an allele to one population compared…”
Bayesian species delimitation using multilocus sequence data (2010, unknown): “εθj εθk ; [5]”
Efficiency of model‐based Bayesian methods for detecting hybrid individuals under different hybridization scenarios and with different numbers of loci (2005, methodology): “2000; Anderson & Thompson 2002).”
Assignment methods: matching biological questions with appropriate techniques. (2005, methodology): “Anderson and Thompson [ 47 ] developed a method designed specifically to detect hybrids.”
Introgression between invasive saltcedars (Tamarix chinensis and T. ramosissima) in the USA (2009, methodology): “NewHybrids computes posterior probabilities that the samples belong to either parental type or to distinct hybrid classes such as F1 and F2 hybrids.”
Bayesian analysis of genetic differentiation between populations. (2003, background): “Recently, ap- method is applicable to several types of codominant markers [e.g., allozymes, single-nucleotide polymorphisms (SNPs), and microsatellites], on the basis of assumptions 1Corresponding author: Rolf Nevanlinna Institute, Research Institute of Hardy-Weinberg equilibrium (HWE) and linkage o”
Efficiency of markers and methods for detecting hybrids and introgression in stocked populations (2009, methodology): “These simulated data were used to carry out admixture analysis using STRUCTURE (Pritchard et al. 2000), NEWHYBRIDS (Anderson and Thompson 2002), BAPS (Corander and Marttinen 2006) and GeneClass (Piry et al. 2004).”