ConSite: web-based prediction of regulatory elements using cross-species comparison
By Albin Sandelin, Wyeth W. Wasserman, Boris Lenhard. Nucleic Acids Res., 2004
481 citations recorded by the source corpus.
Subfields: Molecular Biology, Plant Science
View Paper: https://www.semanticscholar.org/paper/da9675cd0fcdfd7943d49ca250e2457ca3d78322
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Citations in the corpus
- F-SNP: computationally predicted functional SNPs for disease association studies (2007, methodology): “3) (15) and Consite (as of 15 August 2007) (16) are used to identify transcriptional regulatory SNPs in promoter regions; The Ensembl (release 42) (4) and GoldenPath (downloaded 12 December 2006) (17) databases are used to identify SNPs in other transcriptional regulatory regions (e.”
- Systematic discovery of regulatory motifs in human promoters and 3′ UTRs by comparison of several mammals (2005, unknown): “43 miR-29c, miR-29b, miR-29a, miR-107(†), miR-103(†), new(6) 8 CTATGCAA 0.”
- ORS1, an H2O2-Responsive NAC Transcription Factor, Controls Senescence in Arabidopsis thaliana (2011, unknown): “Pair-wise alignments of promoter sequences were performed using ConSite (Sandelin et al., 2004), employing a 50-nucleotide sliding window.”