Creating a bioinformatics nation

By L. Stein. Nature, 2002

359 citations recorded by the source corpus.

Subfields: Information Systems, Information Systems and Management, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/4614f9cfea0ad834b2228029e954644dd1a1bd89

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Citations in the corpus

Taverna: a tool for building and running workflows of services (2006, background): “Screen-scraping is notoriously fragile, because the integrating script is prone to break when the web page or form changes, and for this reason has been likened to ‘medieval torture’ (1).”
Bioconductor: open software development for computational biology and bioinformatics (2004, background): “These are much in line with proposals made by Stein [15] and have aided our work towards creating an environment in which the user perceives tight integration of diverse data, annotation and analysis resources.”
The Agricultural Model Intercomparison and Improvement Project (AgMIP): Protocols and Pilot Studies (2013, neutral): “Other domains, most notably bio-informatics (Stein, 2002) and plant biology (http://iplantcollaborative.”
Next-generation sequencing data interpretation: enhancing reproducibility and accessibility (2012, methodology): “Whereas systems such as the Apple App Store are tightly controlled and distribute applications tailored towards a single operating system that runs on a well-defined set of hardware platforms, the NGS analysis software ecosystem is chaotic and is likely to stay this way (see REFS 30,31 ).”
State of the nation in data integration for bioinformatics (2008, background): “Stein argues that we need to build a ‘‘Bioinformatics Nation” from the competing, fractured ‘‘princely states” of the current situation [2].”
MeMo: a hybrid SQL/XML approach to metabolomic data management for functional genomics (2006, neutral): “Still, the inherently integrative nature of biology [11] requires the content of apparently diverse DBs to be correlated [39,49].”