Anton Nekrutenko
Molecular Biology · 2001–2024
A researcher in the Science corpus: 15 papers; trusts 18 researchers and is trusted by 20 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 179 citations into it; #10,566 of 17,773 by trust here, #1,753 by citations
- Genetics — 42 citations into it
- Information Systems and Management — 23 citations into it; #598 of 3,842 by trust here, #174 by citations
- Information Systems — 19 citations into it; #1,633 of 8,771 by trust here, #427 by citations
- Artificial Intelligence — 10 citations into it
- Computer Networks and Communications — 10 citations into it; #2,305 of 9,886 by trust here, #917 by citations
- Biomedical Engineering — 7 citations into it
- Biophysics — 6 citations into it; #712 of 1,196 by trust here, #384 by citations
Whom Anton Nekrutenko trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Jill P. Mesirov
- Shirley Pepke
- Zhong Wang
- Friedrich Leisch
- Rasmus Nielsen
- Gonçalo R. Abecasis
- Heng Li
- Mark A. DePristo
- Barbara J. Wold
- Mark Gerstein
Who trusts Anton Nekrutenko overall
- C. Begley
- Christoph Bock
- Anne-Laure Boulesteix
- John P. A. Ioannidis
- Geir Kjetil Ferkingstad Sandve
- Abhishek Niroula
- Sangtae Kim
- Johannes Köster
- Robert Rein
- Friedrich Fauser
Papers from Anton Nekrutenko's perspective
Ordered by how strongly the researchers Anton Nekrutenko trusts endorse each paper. Same corpus, a different order for every researcher.
- Basic local alignment search tool.
- Mapping and quantifying mammalian transcriptomes by RNA-Seq (Nature Methods)
- Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing (Nature Methods)
- Searching for SNPs with cloud computing (Genome Biology)
- The human genome browser at UCSC.
- A framework for variation discovery and genotyping using next-generation DNA sequencing data
- STAR: ultrafast universal RNA-seq aligner (Bioinform.)
- EMBOSS: the European Molecular Biology Open Software Suite.
- The Sequence Alignment/Map format and SAMtools (Bioinform.)
- GENCODE: producing a reference annotation for ENCODE (Genome Biology)
Their papers
- Genome sequence of the Brown Norway rat yields insights into mammalian evolution (2004) — 2,140 citations
- Galaxy: a platform for interactive large-scale genome analysis. (2005) — 2,176 citations
- Galaxy, a web-based genome analysis tool for experimentalists (2010) — 1,593 citations
- Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution (2004) — 2,677 citations
- 28-way vertebrate alignment and conservation track in the UCSC Genome Browser. (2007) — 303 citations
- The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update (2018) — 1,614 citations
- The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update (2020) — 637 citations
- Next-generation sequencing data interpretation: enhancing reproducibility and accessibility (2012) — 335 citations
- Evolutionary analyses of the human genome (2001) — 438 citations
- The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update (2024) — 740 citations
- The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update (2022) — 622 citations
- HyPhy 2.5 - a customizable platform for evolutionary hypothesis testing using phylogenies. (2019) — 605 citations
- The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update (2016) — 3,541 citations
- Ten Simple Rules for Reproducible Computational Research (2013) — 814 citations
- Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010) — 3,703 citations