Exome sequencing of gastric adenocarcinoma identifies recurrent somatic mutations in cell adhesion and chromatin remodeling genes

By Z. Zang, Ioana Cutcutache, S. Poon, S. Zhang, J. Mcpherson, J. Tao, V. Rajasegaran, H. Heng, N. Deng, A. Gan and 27 more. Nature Genetics, 2012

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Exome and whole genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity (2013, background): “Likewise, ARID1A and ARID2 have been implicated as tumor suppressors in cancers including gastric cancer 39–42 .”
Lessons from the cancer genome. (2013, neutral): “, 2012), gastric cancer (Zang et al., 2012), head and neck cancer (Stransky et al.”
Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing (2012, background): “These validation rates generally meet or exceed those reported in similar sequencing studies (Banerji et al., 2012; Berger et al., 2012; Gerlinger et al., 2012; Nikolaev et al., 2012; Stransky et al., 2011; Cancer Genome Atlas Research Network, 2011; Totoki et al., 2011; Zang et al., 2012).”
LoFreq: a sequence-quality aware, ultra-sensitive variant caller for uncovering cell-population heterogeneity from high-throughput sequencing datasets (2012, methodology): “SNP calls for validation were obtained using data from a Illumina Human610-Quadv1 array (32) .”