Functional overlap of the Arabidopsis leaf and root microbiota

By Yang Bai, Daniel B. Müller, G. Srinivas, Ruben Garrido-Oter, E. Potthoff, Matthias Rott, Nina Dombrowski, Philipp C. Münch, Stijn Spaepen, Mitja N. P. Remus-Emsermann and 4 more. Nature, 2015

1,159 citations recorded by the source corpus.

Subfields: Molecular Biology, Plant Science

View Paper: https://www.semanticscholar.org/paper/2fd8b2534ea666a003272dcd1ef7c1da99629d92

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Molecular Biology

1. Jian‐Kang Zhu
2. Li Zhan
3. Meijun Chen
4. Wenli Tang
5. Tianzhi Wu
6. Erqiang Hu
7. Zehan Dai
8. Shuangbing Xu

In Plant Science

1. Jian‐Kang Zhu
2. Lizhong Xiong
3. C. Pieterse
4. P. Bakker
5. Yan Guo
6. Yongqing Yang
7. R. Berendsen
8. Peer Schenk

Citations in the corpus

• Emerging microbial biocontrol strategies for plant pathogens. (2018, positive): “Bai et al. [150] showed that the majority of associated microbes can be cultured by employing systematic bacterial isolation approaches.”
• A specialized metabolic network selectively modulates Arabidopsis root microbiota (2019, methodology): “thaliana Col-0 plants grown in soil from the aforementioned Changping Farm by limiting dilution and barcoded sequencing (35).”
• Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival (2018, positive): “A possibly unique feature of plant roots is their capacity to host simultaneously, besides the bacterial microbiota (Lebeis et al., 2015; Bai et al., 2015; Castrillo et al., 2017), a range of soil-borne filamentous eukaryotic microbes such as fungi and oomycetes that have evolved independently in di”
• Phyllospheric Microbiomes: Diversity, Ecological Significance, and Biotechnological Applications (2020, background): “2015; Muller et al.”
• The Role of Soil Microorganisms in Plant Mineral Nutrition—Current Knowledge and Future Directions (2017, background): “…(Brader et al., 2014; Timm et al., 2015), coupled with the huge amount of genomic sequence data from soil microbes that has recently been generated (Bai et al., 2015; Muller et al., 2016), one possibility is to pinpoint the genes that encode metabolic pathways for agriculturally beneficial N, P,…”
• Simplified and representative bacterial community of maize roots (2017, methodology): “From studies performed to date, much has been learned about the microbial communities’ species composition and dynamics (5, 10, 12, 17, 19).”
• Microbial interactions within the plant holobiont (2018, positive): “thaliana leaf- and rootassociated bacterial communities, large-scale genome sequencing and re-colonization of germ-free plants revealed that host-associated microbiota members are specialized and adapted to their respective cognate plant organs [31].”
• Disease-induced assemblage of a plant-beneficial bacterial consortium (2018, background): “Based on the ANI, the closest relative to Xanthomonas sp. WCS2014-23 in the Refseq database is Xanthomonas sp. Leaf148 (97.5% ANI), which has been isolated from A. thaliana leaves [45].”
• Plant abiotic stress response and nutrient use efficiency (2020, background): “More recently, it was shown in Arabidopsis that although the leaf and root microbiomes are specialized in their respective niches, there is a taxonomic and genome-encoded functional capability overlap between the microbiomes of the two organs (Bai et al., 2015).”