The causes and consequences of HIV evolution
By Andrew Rambaut, David Posada, Keith A. Crandall, Edward C. Holmes. Nature reviews genetics, 2004
608 citations recorded by the source corpus.
Subfields: Infectious Diseases, Virology
View Paper: https://www.semanticscholar.org/paper/bf870cb5d7387eda6e85da95e2fcdb5654c09a8c
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In Virology
Citations in the corpus
- Classification of Papillomaviruses (PVs) Based on 189 PV Types and Proposal of Taxonomic Amendments (2010, background): “This is fundamentally different from theemergence of quasi-species of RNAviruses over very short periods of time, such as the human immunodeficiency viruses (Rambaut et al., 2004), or from human rhinoviruses that have rapidly evolved in the relatively short time span since the origin of humans (Palm”
- Viral Phylodynamics (2013, background): “Purifying immune selection dominates evolution of HIV within hosts, but evolution between hosts is largely decoupled from within-host evolution (see Figure 6) [71].”
- Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other tools. (2013, background): “Other factors, that influence the performance of subtyping tools, are the high recombination rate of HIV-1 (Mansky and Temin, 1995) and human migration as determinants of global HIV dynamics (Rambaut et al., 2004).”
- Missing data and the design of phylogenetic analyses (2006, background): “For example, phylogenetic trees are now frequently used to trace the origin, spread, and evolution of viruses and other diseases [1– 5].”
- GUIDANCE: a web server for assessing alignment confidence scores (2010, background): “These viruses are known for their high rate of evolution, which is attributed to an arms race between the virus and the host immune system (23).”
- Quasispecies Theory and the Behavior of RNA Viruses (2010, background): “The ongoing global AIDS pandemic and the resurgence of influenza highlight the difficulties associated with these genetically labile pathogens [4–6].”
- An automated genotyping system for analysis of HIV-1 and other microbial sequences (2005, methodology): “For commercial re-use, please contact journals.permissions@oxfordjournals.org Downloaded from https://academic.oup.com/bioinformatics/article-abstract/21/19/3797/210627 by guest on 29 July 2018”
- Topology of viral evolution (2013, background): “These factors cloud studies that classically rely on phylogenetics, such as estimates of the origin of the HIV pandemic (37), underscoring the need for nonphylogenetic approaches.”