The Arabidopsis Basic/Helix-Loop-Helix Transcription Factor Family Online version contains Web-only data. Article, publication date, and citation information can be found at…

By Gabriela Toledo‐Ortiz, E. Huq, P. Quail. The Plant Cell Online, 2003

1,253 citations recorded by the source corpus.

Subfields: Molecular Biology, Plant Science

View Paper: https://www.semanticscholar.org/paper/be22dc5e92cf3b003779555c68c9cbeab558e027

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Citations in the corpus

Light signal transduction in higher plants. (2004, background): “The possibilities of heterodimer formation of these bHLH transcription factors add layers of complexity to their roles in light signaling (46, 181).”
Network analysis of the MVA and MEP pathways for isoprenoid synthesis. (2013, background): “Members of the PIF family recognize and bind a G-box motif (CACGTG) (133).”
Evolutionary and comparative analysis of MYB and bHLH plant transcription factors. (2011, background): “…nucleotide. bHLH domains with at least five basic amino acids in the basic region and a highly conserved HER motif (His5–Glu9–Arg13), which is found in more than 50% of plant bHLHs, are predicted to bind DNA (Figure 3) (Atchley and Fitch, 1997; Massari and Murre, 2000; Toledo-Ortiz et al., 2003).”
Genome-Wide Analysis of the ERF Gene Family in Arabidopsis and Rice[W] (2006, background): “On the basis of phylogenetic analyses, it has become apparent that a large gene family of transcription factors consists of subgroups of genes that are closely related to each other (Kranz et al., 1998; Pãrenicova et al., 2003; Toledo-Ortiz et al., 2003; Reyes et al., 2004; Tian et al., 2004).”
Jasmonates: biosynthesis, metabolism, and signaling by proteins activating and repressing transcription (2016, background): “, 2012), and a C-terminal bHLH (basic helix–loop–helix) domain for dimerization and binding to the G-box (CACGTG) or G-box like motifs (Toledo-Ortiz et al., 2003).”
The Essential Basic Helix-Loop-Helix Protein FIT1 Is Required for the Iron Deficiency Response (2004, background): “Upon examination of specific residues in the bHLH domain, FIT1 is predicted to belong to a subgroup of bHLHs that recognize the E-box 59-CANNTG-39, but not the G-box in the promoters of target genes (Toledo-Ortiz et al., 2003).”
Global Analysis of DELLA Direct Targets in Early Gibberellin Signaling in Arabidopsis[W] (2007, background): “MYB, bHLH, and WRKY proteins belong to large families of transcription factors that regulate a myriad of processes during plant growth and development (Kranz et al., 1998; Eulgem et al., 2000; Toledo-Ortiz et al., 2003).”
The Regulation of Flavonoid Biosynthesis (2006, background): “Similar to the R2R3-MYB family, the plant bHLH family is very large, with more than 150 members in Arabidopsis (Atchley et al., 2000; Buck and Atchley, 2003; Heim et al., 2003; Toledo-Ortiz et al., 2003).”
ABA-mediated transcriptional regulation in response to osmotic stress in plants (2011, background): “…I HD-Zip TFs mediate ABA-responsive transcription associated with cellular dehydration. bHLH TFs: MYC2 is a key regulator in multiple stress and light signaling pathways Proteins of the bHLH family are present in all eukaryotes and are encoded by 147 genes in Arabidopsis (Toledo-Ortiz et al. 2003).”
A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. (2005, neutral): “The Glu-13Arg-16 pair (Figure 5B, indicated by asterisks) that determines E MBP which was used to tag BES1 (Figure 5A, lanes 10–12), indicating that the complex contains BES1 as box binding specificity of bHLH proteins (Toledo-Ortiz et al., 2003) is conserved in BES1 and BES1 family memwell.”
Transcriptional regulation of ROS controls transition from proliferation to differentiation in the root. (2010, background): “UPB1 belongs to the bHLH-subfamily 14, but it is only distantly related to the other members of that subfamily (Toledo-Ortiz et al., 2003).”
Light-regulated plant growth and development. (2010, background): “The PIFs are part of a 15-member clade of bHLHs, many of which have been shown to act in light-regulated mor phogenesis (Castillon et al., 2007; Heim et al., 2003; Toledo-Ortiz et al., 2003).”
Transcriptome analysis of haploid male gametophyte development in Arabidopsis (2004, methodology): “Genome Biology 2004, 5:R85 annotations of the MADS-box and bHLH transcription factor gene families were defined according to [49, 50 ], respectively.”