THE SIMPLE FOOL’S GUIDE TO PCR

By Andrew P. Martin, C. McIntosh, W. McMillan, Stephen R. Palumbi. 2004

2,725 citations recorded by the source corpus.

View Paper: https://www.semanticscholar.org/paper/ba1c038fb8a4f5a960a18fd9a6931557a436a1cb

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1. Joel W. Martin
2. R. Baird
3. Keith A. Crandall
4. Walter Cho
5. C. Burridge
6. M. Vences
7. D. Felder
8. K. Linse

Citations in the corpus

• DNA-based identification of larval cod in stomach contents of predatory fishes (2002, methodology): “A portion of the mitochondrial 16S rDNA gene was amplified using the primers 16Sar and 16Sb (Palumbi et al., 1991) and sequenced using an Amplitaq FS cycle sequencing kit on a ABI 373A automated sequencer according to the manufacturer’s protocols (Perkin Elmer, Foster City, CA).”
• Molecular diversification of salamanders of the tropical American genus Bolitoglossa (Caudata : Plethodontidae) and its evolutionary and biogeographical implications (2004, background): “, 1989) for cyt b, and the primers 16Sar and 16Sbr (Palumbi et al., 1991) for 16S.”
• Molecular phylogeny of the American Callinectes Stimpson, 1860 (Brachyura: Portunidae), based on two partial mitochondrial genes (2007, background): “TTT ATC AAA AAC AT-3 ), 16br (5 -CCG GTC TGA ACT CAG ATC ACG T-3 ) (Palumbi et al. 1991), 1472 (5 -AGA TAG AAA CCA ACC TGG-3 ) (Crandall and Fitzpatrick 1996) and 16L2 (5 -TGC CTG TTT ATC AAA AAC AT-3 ) (see Fratini et al.”
• Shipboard identification of fish eggs and larvae by multiplex PCR, and description of fertilized eggs of blue marlin, shortbill spearfish, and wahoo (2005, methodology): “The mitochondrial cytochrome b gene was amplified via PCR using primers Gludg-L (5’TGA CTT GAA RAA CCA YCG TTG 3’) (Palumbi et al. 1991) and revThrRF (5’TCC GAC ATC TGG ATT ACA A 3’) (Rocha-Olivares et al. 1999).”
• Phylogenetic relationships and biogeography of midwife toads (Discoglossidae: Alytes) (2004, unknown): “, 1989) for cyt-b, and the primers ‘16Sar’ and ‘16Sbr’ (Palumbi et al., 1991) for 16S.”
• Phylogeny of the Serrasalmidae (Characiformes) based on mitochondrial DNA sequences (2008, methodology): “Primers used for PCR and sequencing of the 12S fragment were L1091 and H1478 (Kocher et al., 1989), and for the 16S fragment, 16Sar-L and 16Sbr-H (Palumbi et al., 1991).”
• Genetic variation and evidence for population structure in eastern North Pacific false killer whales (Pseudorca crassidens) (2007, methodology): “…region was amplified from extracted genomic DNA (lithium chloride protocol: Gemmell and Akiyama 1996; Qiagen DNeasy #69506; Sigma-Aldrich X-tractor Pack 2 cat# 045K6158) using the polymerase chain reaction (PCR) and then sequenced using standard techniques (Saiki et al. 1988; Palumbi et al. 1991).”
• A Molecular Phylogeny of Physidae (Gastropoda: Basommatophora) Based on Mitochondrial DNA Sequences (2007, unknown): “…LCO1490: 50-ggtcaacaaatcataaagatattgg-30 and LCO2198: 50-taaacttcagggtgaccaaaaaatca-30 from Folmer et al., 1994) and a 550 base-pair segment of the mitochondrial 16S rRNA (the primers used were L2510: 50-cgcctgtttatcaaaaacat-30 and H3080: 50-acgtgatctgagttcagaccgg-30 from Palumbi et al., 1991).”
• Decapod crustacean phylogenetics (2009, methodology): “16SrDNA was amplified in both directions with universal 16Sar and 16Sbr primers (Palumbi et al. 1991).”