Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software

By L. Kamentsky, Thouis Raymond Jones, Adam Fraser, Mark-Anthony Bray, David J. Logan, Katherine L. Madden, Vebjorn Ljosa, Curtis T. Rueden, Kevin W. Eliceiri, Anne E Carpenter. Bioinform., 2011

1,030 citations recorded by the source corpus.

Subfields: Biophysics, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/b66561622170d97f4127f4131d485faefe3833f7

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In Biophysics

1. Simon Graham
2. Nasir M. Rajpoot
3. Sunggyun Park

In Molecular Biology

1. Zlatko Trajanoski
2. Nasir M. Rajpoot
3. Josien P. W. Pluim

Citations in the corpus

• Molecular and pharmacological modulators of the tumor immune contexture revealed by deconvolution of RNA-seq data (2017, methodology): “The cell segmentation and cell counting as the last steps of the analysis, were performed with the open-source software Cellprofiler56.”
• Predicting breast tumor proliferation from whole‐slide images: The TUPAC16 challenge (2018, methodology): “LUNIT detected ROIs based on cell/nuclei density estimated with CellProfiler ( Kamentsky et al., 2011 ).”