De novo protein structure prediction by dynamic fragment assembly and conformational space annealing
By Juyong Lee, Jinhyuk Lee, Takeshi N. Sasaki, M. Sasai, Chaok Seok, Jooyoung Lee. 2011
54 citations recorded by the source corpus.
Subfields: Materials Chemistry, Molecular Biology
How researchers see this paper
The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.
In Materials Chemistry
- Andriy Kryshtafovych
- Chaok Seok
- Lisa N. Kinch
- Bohdan Monastyrskyy
- Nick V. Grishin
- Hahnbeom Park
- Xiaogen Zhou
- Gui-jun Zhang
In Molecular Biology
- Andriy Kryshtafovych
- Chaok Seok
- Lisa N. Kinch
- Bohdan Monastyrskyy
- Nick V. Grishin
- Hahnbeom Park
- Yang Zhang
- Xiaogen Zhou
Citations in the corpus
- Refinement of unreliable local regions in template‐based protein models (2012, methodology): “…loop closure (TLC) algo-rithm 11 during global optimization by conformational space annealing (CSA).12 The CSA was previously applied successfully to protein structure prediction13,14 and protein terminus modeling,10 and this is the first study in which CSA is successfully applied to loop modeling.”
- De novo Protein Structure Prediction by Coupling Contact With Distance Profile (2020, methodology): “However, MC simulated annealing method often traps in local energy minimum [44].”
- Evaluation of free modeling targets in CASP11 and ROLL (2016, background): “2–6 However, the past two FM assessments have noted the emergence of top-performing groups that incorporated the use of remote templates or selection and refinement of server models into their prediction methodology.”