Using RepeatMasker to Identify Repetitive Elements in Genomic

By Sequences Maja Tarailo-Graovac, Nansheng Chen. 2009

774 citations recorded by the source corpus.

View Paper: https://www.semanticscholar.org/paper/af9077969ed2c4c1d2edd8f9619de3bbacf3be62

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

1. Xiaowen Feng
2. Heng Li
3. Chong Chu
4. Ryan R. Wick
5. Ben Langmead
6. Michael Alonge
7. Pasi Rastas
8. Todd J. Treangen

Citations in the corpus

• The design and construction of reference pangenome graphs with minigraph (2020, methodology): “q.3, -10 is an insensitive parameter due to the downstream ltering. In the end, minigraph augments the existing graph with identied variations (Fig.2b). Annotating variations We applied RepeatMasker [55] v1.332 to classify interspersed repeats in the longest allele sequence of each variation. Repeat”