A robust algorithm for copy number detection using high-density oligonucleotide single nucleotide polymorphism genotyping arrays.

By Y. Nannya, M. Sanada, Kumi Nakazaki, N. Hosoya, Lili Wang, A. Hangaishi, M. Kurokawa, S. Chiba, D. Bailey, G. Kennedy and 1 more. Cancer Research, 2005

686 citations recorded by the source corpus.

Subfields: Genetics, Molecular Biology, Plant Science

View Paper: https://www.semanticscholar.org/paper/af2bea41b78fd485e05e3834f83595fd85bdb910

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Genetics

1. Stephen W. Scherer
2. Brian Walenz
3. Pauline Crystal Ng
4. Vikas Bansal
5. Granger G. Sutton
6. Vineet Bafna
7. Steven Henikoff
8. Heng Li

In Molecular Biology

1. Brian Walenz
2. Stephen W. Scherer
3. Pauline Crystal Ng
4. Vikas Bansal
5. Granger G. Sutton
6. Vineet Bafna
7. Steven Henikoff
8. Burkhard Rost

In Plant Science

1. Brian Walenz
2. Stephen W. Scherer

Citations in the corpus

• Diagnosis of human preimplantation embryo viability. (2015, background): “…that do not require extensive pre-amplification of DNA and instead were designed for large quantities of starting material [i.e. as in cancer (Nannya et al., 2005), genome-wide association studies (Glessner and Hakonarson, 2011) and prenatal diagnosis (Rajcan-Separovic, 2012; Shaffer et al.,…”
• The Diploid Genome Sequence of an Individual Human (2007, methodology): “jp), the copy number changes were inferred using a HMM built into CNAG [98].”
• Acquired mutations in TET2 are common in myelodysplastic syndromes (2009, methodology): “We used the Genotyping Analysis Software GTYPE (Affymetrix) for analysis of data and quality control, and the public domain CNAG software packag”
• Development of query strategies to identify a histologic lymphoma subtype in a large linked database system. (2006, neutral): “In addition to the application to BAC based microarrays, this approach has been employed in the context of the oligonucleotide platforms (Iafrate et al. 2004; Nannya et al. 2005; Zhao et al. 2004).”