Evolution, diversity, and molecular ecology of marine prokaryotes

By S. Giovannoni, Rappé. 2000

522 citations recorded by the source corpus.

View Paper: https://www.semanticscholar.org/paper/a9bda9ac0414e34e88aa5585aa12e206f74ff765

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Citations in the corpus

Diversity and distribution of coral-associated bacteria (2002, background): “None of the coral-associated bacterial 16S rDNAs belonged to the ubiquitous marine groups SAR11 and SAR116 (Giovannoni & Rappe 2000).”
Biodiversity of Vibrios (2004, background): “, water, gut tissue, and sediment) followed by clone library and 16S rRNA sequencing or alternatively FISH of filter-fixed cells with oligonucleotide probes targeting the 16S rRNA and subsequent visualization by epifluorescence microscopy has provided an efficient means of detecting, identifying, an”
Temporal variation and detection limit of an estuarine bacterioplankton community analyzed by denaturing gradient gel electrophoresis (DGGE) (2006, background): “Using molecular tools, many novel microorganisms have been discovered from various environments (Akkermans et al. 1999, Giovannoni & Rappé 2000).”
Compositional changes in free‐living bacterial communities along a salinity gradient in two temperate estuaries (2002, background): “…nutrients have been hypothesized to drive the seasonal succession of the bacterial assemblages in the Baltic Sea (Pinhassi and Hagström 2000), and shifts in bacterial composition have been linked to changes in the nature of the dissolved organic mater (DOM) pool (Cottrell and Kirchman 2000a).”
The uncultured microbial majority. (2003, unknown): “, (3, 38, 40)], freshwater bacterioplankton [e.”
Stability of bacterial and viral community compositions in Danish coastal waters as depicted by DNA fingerprinting techniques (2002, background): “The last decade of microbial molecular ecology has resulted in a growing awareness of the tremendous bacterial species diversity found in the world’s oceans (Giovannoni & Rappé 2000).”
Distribution and activity of Bacteria and Archaea in the deep water masses of the North Atlantic (2006, background): “…pointed to differences in the biogeographical distribution of the major groups of planktonic Archaea (López-Garcı́a et al. 2001; Bano et al. 2004; Teira et al. 2006) and Bacteria (Giovannoni and Rappé 2000), which suggest that distinct water masses may harbor distinct prokaryotic communities.”
Covariance of bacterioplankton composition and environmental variables in a temperate delta system (2003, background): “7) or the ocean (Giovannoni & Rappé 2000).”
UniFrac: a New Phylogenetic Method for Comparing Microbial Communities (2005, background): “The resemblance may instead arise because terrestrially impacted seawater has a higher concentration of particles, and particleassociated and freely suspended marine bacteria are known to differ (12).”
Microscale patchiness of bacterioplankton assemblage richness in seawater (2001, background): “The determination of 16S rRNA gene diversity in community DNA is a powerful tool, which has been extensively applied to examine spatial and temporal variations in species richness of Bacteria and Archaea in aquatic environments (for a review, see Giovannoni & Rappè 2000).”
Diversity, abundance, and biomass production of bacterial groups in the western Arctic Ocean (2007, methodology): “While Betaproteobacteria and Actinobacteria do not typically dominate marine communities (Glöckner et al. 1999, Kirchman et al. 2005), representatives are often present in libraries from temperate regions (Giovannoni & Rappé 2000, Rappé et al. 2000, Fuchs et al. 2005).”
Prokaryotic community structure and heterotrophic production in a river-influenced coastal arctic ecosystem (2006, background): “The SAR11 clade (Pelagibacter ubique) within this lineage accounts for a major fraction of all ribosomal RNA genes that have been identified in the sea (Rappé et al. 2002), and the related α-Proteobacteria Roseobacter is also widely distributed (Giovannoni & Rappé 2000).”
Unusual bacterioplankton community structure in ultra‐oligotrophic Crater Lake (2001, background): “In the open ocean, bacterioplankton at 200–250 m are dominated by three groups: SAR11 a-proteobacteria, SAR202 green nonsulfur bacteria, and marine group I crenarchaeota (Giovannoni and Rappé 2000; Giovannoni and Urbach unpubl. data; Massana et al. 2000).”
Response of bacterial and viral communities to nutrient manipulations in seawater mesocosms (2003, result): “The presence of β-Proteobacteria was low in all mesocosms throughout the experiment, a result consistent with other studies in marine environments (Glöckner et al. 1999, Giovannoni & Rappé 2000).”