Dating Lineages: Molecular and Paleontological Approaches to the Temporal Framework of Clades

By S. Magallón. INTERNATIONAL JOURNAL PLANT SCIENCES, 2004

175 citations recorded by the source corpus.

Subfields: Geometry and Topology, Molecular Biology, Paleontology

View Paper: https://www.semanticscholar.org/paper/a5b00e130a88a6532ecc1bfb5a0fc65845ae009a

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Citations in the corpus

Evolution of leafy liverworts (Jungermanniidae, Marchantiophyta) : estimating divergence times from chloroplast DNA sequences using penalized likelihood with integrated fossil evidence (2007, methodology): “Incorrect assignments of fossils—either as calibration points or in the form of age constraints—are one of the major sources of errors in attempts to estimate divergence times (Magallón, 2004; Renner, 2005).”
Molecular dating of phylogenetic trees: A brief review of current methods that estimate divergence times (2006, methodology): “autocorrelation is an explicit a priori criterion to guide inference of among-lineage rate change and is implemented in several methods (Magallón, 2004).”
Molecular dating of the ‘Gondwanan’ plant family Proteaceae is only partially congruent with the timing of the break‐up of Gondwana (2007, background): “To serve such a purpose, a fossil must be appropriately placed on the phylogenetic tree based on synapomorphies of extant clades (Magallón, 2004).”
Vicariance or long‐distance dispersal: historical biogeography of the pantropical subfamily Chrysophylloideae (Sapotaceae) (2011, methodology): “We also accounted for uncertainty in the placement of calibration points to either stem or crown nodes (Magallón, 2004; Renner, 2005; Ho & Phillips, 2009).”
Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots (2010, methodology): “Age estimates for individual clades in a molecular dating analysis can be strongly affected by the number of independent fossil constraints employed, as well as theirproper assignment tonodes in the tree beinganalyzed,which in turn depends heavily on taxon sampling (11, 35, 38, 39).”
Fossil ants (Hymenoptera: Formicidae): ancient diversity and the rise of modern lineages (2017, background): “While some authors (e.g., MAGALLÓN 2004, WARD 2007) have used the term stem group to describe the crown group a n d stem lineages, this usage is not adopted here.”
Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times. (2009, methodology): “The available relaxed-clock methods have been compared in several reviews (Magallón 2004; Welch and Bromham 2005; Lepage et al. 2006; Rutschmann 2006), and their performance has been assessed in a number of studies (e.g., Ho et al. 2005; Drummond et al. 2006; Lepage et al. 2007).”
Molecular phylogeny and systematics of the Pieridae (Lepidoptera: Papilionoidea): higher classification and biogeography (2006, background): “…dated fossils, rather than ages of vicariance events inferred from biogeography and geological data, to estimate minimum divergence times of lineages within the framework of our phylogenetic hypothesis (Hillis, Mable & Moritz, 1996b; Arbogast et al., 2002; Hedges & Kumar, 2003; Magallón, 2004).”
Climate cooling promoted the expansion and radiation of a threatened group of South American orchids (Epidendroideae: Laeliinae) (2010, unknown): “The methodological and conceptual differences between r8s, BEAST, and some other methods available today for molecular dating have been reviewed by several authors [12,14,22-24].”
Testing Hypotheses on Species Delimitations and Disjunctions in the Liverwort Bryopteris (Jungermanniopsida: Lejeuneaceae) (2006, background): “The importance of correct calibration point assignments has recently been discussed in several publications (e.g., Magallón 2004; Renner 2005).”
Origin of Mediterranean insular endemics in the Boraginales: integrative evidence from molecular dating and ancestral area reconstruction (2009, background): “minimum, rather than fixed, ages to account (at least in part) for the imprecision of the fossil age estimates (Magallón, 2004).”
A molecular phylogeny of the Solanaceae (2008, background): “…angiosperms (Wikstrom & al., 2001), a suggested minimum date of origin for the Solanales of 82–86 million years before present (bearing in mind a substantial error in any such estimates; Hillis & al., 1996; Magallon, 2004) suggests an origin of Solanaceae close in time to the split-up of Gondwana.”