Quantitation of magnetic resonance spectroscopy signals: the jMRUI software package
By D. Stefan, F. D. Cesare, A. Andrasescu, E. Popa, A. Lazariev, E. Vescovo, O. Strbak, S. Williams, Z. Starčuk, M. Cabanas and 2 more. 2009
513 citations recorded by the source corpus.
Subfields: Atomic and Molecular Physics, and Optics, Radiology, Nuclear Medicine and Imaging, Spectroscopy
View Paper: https://www.semanticscholar.org/paper/a04b37ceff788c4474deb0829a9e14d63963ee2f
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In Radiology, Nuclear Medicine and Imaging
In Spectroscopy
Citations in the corpus
- Current practice in the use of MEGA-PRESS spectroscopy for the detection of GABA (2012, unknown): “…called basis sets, such as LCModel (Provencher, 1993, 2001), TARQUIN (Wilson et al., 2010), and QUEST in jMRUI (Naressi et al., 2001; Stefan et al., 2009), originally designed for unedited spectra, can be applied to edited spectra with appropriate modifications to basis sets and…”
- Advanced processing and simulation of MRS data using the FID appliance (FID‐A)—An open source, MATLAB‐based toolkit (2017, methodology): “A number of software packages are available, both freely and commercially, to aid in various aspects of the MRS workflow, including spectral simulation (14–18), spectral processing (13,16,17,19,20), radiofrequency (RF) pulse design (21), and spectral analysis (17,18,20,22–26).”
- Gamma-Aminobutyric Acid Concentration is Reduced in Visual Cortex in Schizophrenia and Correlates with Orientation-Specific Surround Suppression (2010, unknown): “Using jMRUI software (Stefan et al., 2009), all spectra were phase aligned with reference to water, zero filled from 1024 to 4096, apodized with a 4 Hz Gaussian filter, and frequency aligned to creatine (Cr) at 3.”
- Preprocessing, analysis and quantification in single-voxel magnetic resonance spectroscopy: Experts’ consensus recommendations (2020, methodology): “Several software packages provide implementations of this approach, including LCModel,(46) Tarquin,(47) Vespa,(57) FiTAID,(48) INSPECTOR(63) and jMRUI.(64) This approach is well suited to analysis of crowded MRS data, such as short-echo-time (1)H-MRS of the human brain, but can also be used to fit m”