Homology, Genes, and Evolutionary Innovation

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It’s the song, not the singer: an exploration of holobiosis and evolutionary theory (2017, background): “Formally similar cases, in which homologous anatomical structures (likely present in ancestors) are produced by non-homologous developmental processes (cell–cell interactions) have been addressed by Sommer (2008) and by Wagner (2007, 2014).”
The extended evolutionary synthesis: its structure, assumptions and predictions (2015, background): “Conceptual frameworks should be evaluated on their ability to stimulate useful research [1,131].”