Whole genome genotyping technologies on the BeadArray™ platform

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PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data. (2007, methodology): “These arrays were constructed us-ing HapMap data and contain primarily tag SNPs (Steemers and Gunderson 2007).”
High-throughput genotyping and mapping of single nucleotide polymorphisms in loblolly pine (Pinus taeda L.) (2008, unknown): “The results presented in this study also open the door for applications of even higher throughput technologies such as the Infinium platform from Illumina (Steemers and Gunderson 2007).”
High density DNA methylation array with single CpG site resolution. (2011, methodology): “After hybridization, the array was processed through a primer extension and an immunohistochemistry staining protocol to allow detection of a single-base extension reaction [41–43].”
Development and Application of High-density SNP Arrays in Genomic Studies of Domestic Animals (2010, unknown): “In addition, the bead density, the redundancy of beads per bead type and the final expense (cost-effectiveness) influence the number of SNPs being assembled into the commercially released SNP arrays (Steemers and Gunderson, 2007).”
Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology (2009, methodology): “Samples were genotyped in the Illumina services lab and data was evaluated for robust genotyping [24].”