High-throughput genotyping and mapping of single nucleotide polymorphisms in loblolly pine (Pinus taeda L.)

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The genomics of local adaptation in trees: are we out of the woods yet? (2017, unknown): “…et al. 1994), randomly amplified DNA (Grattapaglia & Sederoff 1994), and expressed sequence tag polymorphisms (Temesgen et al. 2001) were among the first used to test evolutionary hypotheses in trees related to genome organization and the mapping of complex traits (discussed in Eckert et al. 2009).”
Genetic Resistance to Fusiform Rust in Southern Pines and White Pine Blister Rust in White Pines—A Contrasting Tale of Two Rust Pathosystems—Current Status and Future Prospects (2014, background): “As loblolly pine SNP maps are available [93] and an initial draft of its genome sequence is released [92], a further SNP mapping of nine loblolly pine R genes and comparison of those fine R genetic maps between subgenus Strobus and subgenus Pinus will help us understand more about the evolution of g”
Forest tree genomics: growing resources and applications (2011, background): “With the advent of SNP markers and high-throughput SNP genotyping, dense genetic maps are beginning to emerg”
Genomic selection in forest tree breeding (2011, background): “In Pinus taeda, with a recombining genome of similar size (Sewell et al. 1999), a SNP array with ~7,000 SNP has been developed providing around 3,000 informative markers at the population level (Eckert et al. (2009b); G. Peters personal communication).”