Processing of X-ray diffraction data collected in oscillation mode.

By Zbyszek Otwinowski, Wladek Minor. 1997

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

Citations in the corpus

De novo protein design by deep network hallucination (2020, methodology): “Both datasets were subsequently processed with HKL2000 and Scalepack suite 52 .”
Energetic optimization of ion conduction rate by the K+ selectivity filter (2001, methodology): “The data were processed and reduced with Denzo and Scalepac”
Phosphorylation of p62 activates the Keap1-Nrf2 pathway during selective autophagy. (2013, methodology): “Data processing and reduction were conducted using HKL-2000 (Otwinowski and Minor, 1997).”
Reconfigurable asymmetric protein assemblies through implicit negative design (2021, unknown): “Diffraction images were integrated using XDS (48) or HKL2000 (49) and merged and scaled using Aimless (50).”
Structure of the Shroom-Rho Kinase Complex Reveals a Binding Interface with Monomeric Shroom That Regulates Cell Morphology and Stimulates Kinase Activity* (2016, methodology): “Integration, merging, and scaling of the diffraction data were performed using HKL2000 (56).”
A noncompeting pair of human neutralizing antibodies block COVID-19 virus binding to its receptor ACE2 (2020, methodology): “The 348 dataset was processed with HKL2000 software(21).”
Crystal structures of the pilus retraction motor PilT suggest large domain movements and subunit cooperation drive motility. (2007, methodology): “Data were integrated and scaled with HKL2000 (Otwinowski and Minor, 1997) (Table 1).”
Conformational strictness required for maximum activity and stability of bovine pancreatic ribonuclease A as revealed by crystallographic study of three Phe120 mutants at 1.4 Å resolution (2002, methodology): “Data from CCD detector system and the imaging plate detector system were processed and scaled using the MOSFLM program in Collaborative Computational Project No. 4 (1994) and the DENZO program (Otwinowski and Minor 1997), respectively.”
Concentration-dependent oligomerization of cross-linked complexes between ferredoxin and ferredoxin-NADP+ reductase. (2013, methodology): “Diffraction images were collected using an MX225HE CCD detector (Rayonix, USA) equipped with a Helix Technology cryo-system (Cryo Industries of America, USA), integrated on the CCD camera, and scaled with the HKL-2000 program package [18].”
Crystal structures of asymmetric ClpX hexamers reveal nucleotide-dependent motions in a AAA+ protein-unfolding machine (2009, unknown): “Diffraction data were integrated and scaled using HKL2000 (Otwinowski and Minor, 1997) and converted to structure-factor amplitudes using TRUNCATE (CCP4, 1994).”
Structure of N-terminal Domain of NPC1 Reveals Distinct Subdomains for Binding and Transfer of Cholesterol (2009, methodology): “Diffraction data were collected at the Advanced Photon Source (Argonne, IL, USA) beam line 19-ID and 19-BM and processed with HKL2000 (Otwinowski and Minor, 1997) and the CCP4 suite (Collaborative [3H]cholesterol transferred to liposomes was measured in the flow-through of the nickel column as…”